Gene BURPS668_3527 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBURPS668_3527 
SymbolmurD 
ID4883581 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia pseudomallei 668 
KingdomBacteria 
Replicon accessionNC_009074 
Strand
Start bp3456383 
End bp3457897 
Gene Length1515 bp 
Protein Length504 aa 
Translation table11 
GC content73% 
IMG OID640129455 
ProductUDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase 
Protein accessionYP_001060537 
Protein GI126442170 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0771] UDP-N-acetylmuramoylalanine-D-glutamate ligase 
TIGRFAM ID[TIGR01087] UDP-N-acetylmuramoylalanine--D-glutamate ligase 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTCGGAG ATCGGCAGCG GCCGATGGTG CTCGTGCTGG GGCTCGGCGA ATCGGGCCTC 
GCGATCGCGC GGTGGTGCGC GAGGCACGGG TGCCGGTTGC GCGTCGCCGA TACGCGCGAG
ACGCCGCCCA ACCTGGCCGC GCTGACGGCG GCGGGCGTCG ATTTCGAATT CGTCGGCGGC
GCGTTTTCGC CGGCGCTCGT CGACGGCGGG ATCGAGCTCG TCGCGCTGAG CCCCGGCCTG
TCGCCGCTCG CGGAGGATCT CGCGCCGCTC GTCGCCGCCG CACGCGAGCG CGGCATTCCC
GTGTGGGGCG AGCTCGAATT CTTCGCGCAG GCGCTCGCGG CGCTCGGCGC GAACGGCTAC
GCGCCGAAGG TGATCGCGAT CACCGGCACG AACGGCAAGA CGACGACGAC GAGCCTCGCG
GGCCTGCTGT GCGAGCGCGC GGGCAAGAAG GTCGCGGTCG CGGGCAACAT CAGCCCGGCG
ATGCTCGACA AGCTGACCGA AGCGATCGAC GCGGCGGCGC TGCCGGACGT GTGGGTGCTC
GAGCTGTCGA GCTTTCAGCT CGACACCGCG CACACGTTCG CGCCCGATGC GGCAACGATC
CTCAACATCA CGCAGGACCA TCTCGACTGG CACGGCGGTT TCGCCGCGTA TGCGGCCGCG
AAGGGCCGCG TCTTCGGGCC GCGCACGGTG CGCGTGCTCA ATCGCGACGA TGCCGAGGTG
ATGCGCTTCG CGCCGCCCGC CGCGGCCGCC GACGCGCCGC GCGCGGTCAC GTTCGGCCTG
AACGAGCCGG CCGCCGACGG CGATTACGGC CTGCTGCGCG AAAACGGCAT CGCATGGCTC
GTCGAGGCGA TCGATCGCGA CGCGGCCGAT GCGCCCGCCG CGCCGTCGCG CCGGCGCAAG
CAGGAGGCGG CGAATCCGCC CGACATCGCG CTCAAGCGGC TGATGCCCGC CGACGCGTTG
CGCATCCGCG GGCTGCACAA CGCGGCGAAC GCGCTCGCCG CCTATGCGCT CGCGCGCGCG
ATCGGCCTGC CGGCCGCGCC GCTCCTGCAC GGCTTGCGCG AATACCGCGG CGAGCCGCAC
CGCGTCGAAG TGATCGCGAC GCTCGACGGC GTCGACTATG TCGACGACAG CAAGGGCACG
AACGTCGGCG CGACGGTCGC GGCGCTCGAC GGCCTCGCGC AGCGTGCGGT GCTGATCGCG
GGCGGCGACG GCAAGGGGCA GGATTTCGAG CCGCTCGCGG CGCCCGTCGC GCGCTGGTGC
CGCGCGGTGA TGCTGATCGG CCGCGACGCG CCCGCGCTGC GCGAGGCGCT CGCCGACACG
GGCGTGCCGC TTGCCGATCA CGCGACGCTC GAAGCCGCGG TGCGCGCGGC GAGCGCGCTC
GCGCAGCCGG GTGACGCGGT GCTGCTGTCG CCCGCGTGCG CGAGCCTCGA CATGTTCCGC
AATTACGCAC ACCGGGCCGA CGTGTTCCGC AGCGCGGTCG AAGATATCGC CTTGGAAAAA
GGAACGACGC TATGA
 
Protein sequence
MFGDRQRPMV LVLGLGESGL AIARWCARHG CRLRVADTRE TPPNLAALTA AGVDFEFVGG 
AFSPALVDGG IELVALSPGL SPLAEDLAPL VAAARERGIP VWGELEFFAQ ALAALGANGY
APKVIAITGT NGKTTTTSLA GLLCERAGKK VAVAGNISPA MLDKLTEAID AAALPDVWVL
ELSSFQLDTA HTFAPDAATI LNITQDHLDW HGGFAAYAAA KGRVFGPRTV RVLNRDDAEV
MRFAPPAAAA DAPRAVTFGL NEPAADGDYG LLRENGIAWL VEAIDRDAAD APAAPSRRRK
QEAANPPDIA LKRLMPADAL RIRGLHNAAN ALAAYALARA IGLPAAPLLH GLREYRGEPH
RVEVIATLDG VDYVDDSKGT NVGATVAALD GLAQRAVLIA GGDGKGQDFE PLAAPVARWC
RAVMLIGRDA PALREALADT GVPLADHATL EAAVRAASAL AQPGDAVLLS PACASLDMFR
NYAHRADVFR SAVEDIALEK GTTL