Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BURPS668_3507 |
Symbol | pilC |
ID | 4884185 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia pseudomallei 668 |
Kingdom | Bacteria |
Replicon accession | NC_009074 |
Strand | + |
Start bp | 3435274 |
End bp | 3436491 |
Gene Length | 1218 bp |
Protein Length | 405 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 640129435 |
Product | type IV pilus biogenesis protein PilC |
Protein accession | YP_001060517 |
Protein GI | 126441895 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG1459] Type II secretory pathway, component PulF |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGTACAC GCGGACCGGC TTCGCCGATC GAGTCCCGAT ACCGTTGGGC GGGCGTGACG ATCGACGGCG CGCGGCGGCG CGGCATGTTG ATCGCCGTCG ATCCGTCCGC TGCGCGCGCT GCGCTCAAGC GCACGGGCGT CACCGTGCTG CGCCTCGAAG CGCGCGGCCG GGCGCCGCAG CCCGCCGCAC GGGCGAGCGA AGTCACCCGT TTCGCGCGGC AGCTCGCGGG ACTCCTGCAC GCGGGTCTCG CGCTTGCGCC GTCGCTCGAA CTGCTCGCGC AAGCGACGCA GCGAAGCGAA ATGCCCCGCG TCGCGGCGGG CCTCGCGCGC GAGATCGTGG CGGGACGGCA GTTCTCCGCC GCGCTGCGCC GCTACCCGCG CCAGTTCGAT CCGTTTTTCT GTCAACTGGT CGCAGTCGGC GAAACGGCGG GAGCGCTCGC CGCGGTGCTC ACACGGCTCG CCGACGATCG CGAGCGTGCA GCCGCGCAAT ATGCGCGCGT CAAAGGCGCG CTCGCTTACC CGGCCGCCGT GCTGCTGTTC GCGCTCGCGA TCACCGCCGC ATTGCTGGTC TGGGTGGTGC CGACGTTCGA ACAGATCTTC GCGGGCTTCG GCGCCCCGCT GCCTGCGCCG ACCCGTTTCG TCCTCGCGCT GTCGGCCGGC GTGACGCGCT GGAGCGCACC TGCCGCCGCA GCCGCGCTAT TCGCCTGCGT TGCCATTCGC CATGCGGCGC GCCGTTCCGC AGCCGCGCGC GTCGCGCTCG CGCGGACGCT GCTGCGCGCG CCGTTCGTCG GGCCGCTCGT GCAGACGCTC GCCGCCGCCC GATGGAGCCG CGCGCTCGGC ACGTTGCTCG CCGCCGGCAC GCCGCTCACC GACGCATTCG CGGCGCTGTC GAACGCGACC GGCAACCCGC GTTTCGATCT CGCGACAGCC GGCATCGCCG CGCGGGTGCT GCATGGCGAA CGGCTCGCCC GCGCGATGCG CGCCGAAGGC TGCTTCCCTG ACGATCTCGT CCAGCCGATC GCCGTCGCCG AGGAATCGGG CACGCTGGAC ACAATGCTCA TCGACGCCGC GACACTCTGC GATCGCCGCG TCGACGAACG GATCAGCGCG CTCGCGAACC TGTGCGAACC CGTCGTGATC GTCGTGCTGG GCGCGCTGAT CGGCGCGCTC GTCGTCGCGA TGTACTTGCC GATCGTCCAG CTCGGCAACG TGGTGTAG
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Protein sequence | MSTRGPASPI ESRYRWAGVT IDGARRRGML IAVDPSAARA ALKRTGVTVL RLEARGRAPQ PAARASEVTR FARQLAGLLH AGLALAPSLE LLAQATQRSE MPRVAAGLAR EIVAGRQFSA ALRRYPRQFD PFFCQLVAVG ETAGALAAVL TRLADDRERA AAQYARVKGA LAYPAAVLLF ALAITAALLV WVVPTFEQIF AGFGAPLPAP TRFVLALSAG VTRWSAPAAA AALFACVAIR HAARRSAAAR VALARTLLRA PFVGPLVQTL AAARWSRALG TLLAAGTPLT DAFAALSNAT GNPRFDLATA GIAARVLHGE RLARAMRAEG CFPDDLVQPI AVAEESGTLD TMLIDAATLC DRRVDERISA LANLCEPVVI VVLGALIGAL VVAMYLPIVQ LGNVV
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