| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS668_3503 |
|---|
| Symbol | |
|---|
| ID | 4885222 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia pseudomallei 668 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009074 |
|---|
| Strand | - |
|---|
| Start bp | 3427890 |
|---|
| End bp | 3429890 |
|---|
| Gene Length | 2001 bp |
|---|
| Protein Length | 666 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 640129431 |
|---|
| Product | AAA_5 ATPase |
|---|
| Protein accession | YP_001060513 |
|---|
| Protein GI | 126438633 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG1401] GTPase subunit of restriction endonuclease |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.414068 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCAAAACC TGCTACAACT TCTTAGTTCT AAGACGGTGG CAGAGTCTTC AGTGCTGAAG
CCTCGGGCAT TGGCAGAACT GGAAGAGATA TTTCCGTCGC CGATGTGGGG CGTCAGTGAA
AACGACGATG CCTACACACC GGCGAACTAT AAGAATCTGT GGGACAACGA GTTGCGCAAA
CCGATACAGC GGTTCCTGGC GCAACAGAAT GTTGATGGTG AAGCCTATGG GCGCTGGCTC
GGAGAGATTC ATTACCACAG TTTTTCCATA TATTTGACAG CAGCTTTTCC GAGTGGTTAT
CGGGACAACG TCGGCTGGAG AATTTCAATC TTTTCAATCC CCGGCGTAAG CGCGTCGCTG
GTTGGTCTGG CATCGCACTA TCAGCAGGCG ATGAATCACA ACGCGCTGGG CAAAGCATCA
GCGCTGCTGC TAGAGACAGC CCGCCTCGGG CTTGAAGCAT CGGGTGACTC ATCGCTGCAA
CTGCCGGGGC GCGCGGTTGA CGGCGCCGAC TGGGATGGCT GGTCTCTCCT TTCTTCGCCT
GTTTTGCAGG TATGCGGCGT AGACATCTCC TCGGTAGACT CATCTGGACT GAGCATCAAA
GGCGCCCGCA CGACAACCGC GAAGAAAACC ATTGCGTCTT TCATTTCAGT AATTCCGGCG
TTCGCCTCCA TGGATGCAGC GACTGTGCGG TCCGAACTGG AGAAACTACG CGACGCTGCG
ATTTACTTAT CCGAACATAC TTACCCCTTT AATAATCTCG AGGATTTTGA GCAGCTTCGC
TCTATCGCCC TAACAGACCT CAGTGCGGCG GGAATCCGAT TGCGCCTGAA GGCTGGCAGT
GCAACGAAGT CAGTAGTTCG CGTGTATTAC GGTCCTCCGG GCACGGGAAA AACCTTGACC
GCGGTCAAGG AAGCGATACG ACTGATTGAC CCGACGTTCC AGGGTGGCGT TGCCGACGCG
TTTACCCGTT TTAACGAGTC TCATGAAAAG TGTTGTTTTT TGACCTTTCA TCCTTCGTTG
CAATACTACG ACCTGGTCGA ATCCATACGA CCTACACTGA CCAATGACAA TGAAGCGGCA
ACTGCCCGGG ATTCGGCCGA TAGCGAAGCG GACCCGGTTC TGAATTCACG CTCCGATTCA
AGTGAGCCCC AGAGCTCGCC CAACGCGCTC AGGTACGACG TCTTCGAGGG CCCGCTACTT
CGAATGGTCC GGCGTGCGCA AAGGGACCCG CGAGGCAACT ATGTAATCGT CATCGACGAA
ATTAATCGCG GCGACCTAAG CCGGGTGCTG GGCCCGCTTA TTTCCAGCCT TGAGGCAGAC
AAGCGGGCAG GAAGCGATTT TCCTATAGGG TATGAGCTGC AATATCCGCA GAACGGTGAG
GACGGAAGAC TGTATCTCCC GTCCAATTTG CACATTCTCG GCACAATGAA TTCGACCGAT
AGGAACGTAG CGCTGGTGGA CTACGCTCTT CGCAGGCGGT TTGACTTTGT CGAGATTCCG
CCGGAACCGG AACTCCTCGC AACCACCGTA GACGAACTGC CCATCGATTG CGCTGCGCTG
CTCCGGACGC TCAATCAGCG GATAGCGTAT CTGCTAGACG ACAACCATCG CCTCGGGCAC
GGTTTCCTCA TGGGCTGCCG GAACAATAGA GACGTGTGCG AACGCTTGGC CAAGAAGGTG
ATTCCCCAAC TCCGAGAATA CTTCTTTGGA AACGAGGGGT TGCTGCTCCT CATCTTCGGT
GAGGCCGACA GCCAAGAGTT TAAGTTGTTC CGCCAAGACT CGAATTCGGC TGCGTTTTCC
GACCTTTTCG GCGTTTCCCA GGATGTTGCT GCATCCCATG GTTTCCGCAG CGCATCTAGG
GCGGTGCATT TGAACCTTGA TTCCAGATTC TGGAGTGAGG ATGCCATGCC GCCTGGGCCG
ACCGACCTCG AATACGCCGC GCAATGCGTC CGAAAGGTCT ACGGTCATCG GCAGGAAAGC
TCACCCGTCC GGACGTTATG A
|
|---|
| Protein sequence | MQNLLQLLSS KTVAESSVLK PRALAELEEI FPSPMWGVSE NDDAYTPANY KNLWDNELRK
PIQRFLAQQN VDGEAYGRWL GEIHYHSFSI YLTAAFPSGY RDNVGWRISI FSIPGVSASL
VGLASHYQQA MNHNALGKAS ALLLETARLG LEASGDSSLQ LPGRAVDGAD WDGWSLLSSP
VLQVCGVDIS SVDSSGLSIK GARTTTAKKT IASFISVIPA FASMDAATVR SELEKLRDAA
IYLSEHTYPF NNLEDFEQLR SIALTDLSAA GIRLRLKAGS ATKSVVRVYY GPPGTGKTLT
AVKEAIRLID PTFQGGVADA FTRFNESHEK CCFLTFHPSL QYYDLVESIR PTLTNDNEAA
TARDSADSEA DPVLNSRSDS SEPQSSPNAL RYDVFEGPLL RMVRRAQRDP RGNYVIVIDE
INRGDLSRVL GPLISSLEAD KRAGSDFPIG YELQYPQNGE DGRLYLPSNL HILGTMNSTD
RNVALVDYAL RRRFDFVEIP PEPELLATTV DELPIDCAAL LRTLNQRIAY LLDDNHRLGH
GFLMGCRNNR DVCERLAKKV IPQLREYFFG NEGLLLLIFG EADSQEFKLF RQDSNSAAFS
DLFGVSQDVA ASHGFRSASR AVHLNLDSRF WSEDAMPPGP TDLEYAAQCV RKVYGHRQES
SPVRTL
|
|---|
| |