| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS668_3394 |
|---|
| Symbol | gltK |
|---|
| ID | 4885176 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia pseudomallei 668 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009074 |
|---|
| Strand | - |
|---|
| Start bp | 3322117 |
|---|
| End bp | 3322794 |
|---|
| Gene Length | 678 bp |
|---|
| Protein Length | 225 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 640129322 |
|---|
| Product | glutamate/aspartate ABC transporter, permease protein GltK |
|---|
| Protein accession | YP_001060405 |
|---|
| Protein GI | 126440693 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0765] ABC-type amino acid transport system, permease component |
|---|
| TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCATCAGT TCGACTGGAG TAGTATCCCC GGCGCGCTGC CGACGCTCTG GACGGGCGCG
GTCGTCACGT TCAAGATCAC GCTGCTCGCG ATCGTGATCG GCATCGTCTG GGGCACGTTG
CTCGCGCTGA TGCGCCTGTC GGGCGTGAAG CCGCTCGCGT GGTTCGCGCA GGGCTACGTC
ACCGTGTTCC GCTCGATCCC GCTCGTGATG GTGCTGCTGT GGTTTTTCCT GATCGTGCCG
CAGTTGCTGC AGGGCGTGCT CGGGCTGTCG CCGACGATCG ACATCCGGCT CGCCTCGGCG
ATGGTGGCGT TCTCGCTGTT CGAGGCCGCG TATTATTCGG AGATCATCCG CGCGGGCATT
CAGGCGGTGC CGCGCGGGCA GGTGAACGCC GCGTTCGCGC TCGGCATGAA CTATGCGCAG
GCGATGCGCC TCGTGATCCT GCCGCAGGCG TTTCGCGCGA TGGTGCCGCT GCTGCTCACG
CAGGCGATCG TGCTGTTCCA GGACACGTCG CTCGTCTACG TGATCAGCCT CGCGGACTTC
TTCCGCACGG CCGCGAACAT CGGCGATCGC GACGGCACGA GCGTCGAGAT GATCCTGTTC
GCGGGCGCAT GCTATTTCGT CGTGTGCTCG GTCGCATCCG CGTTGGTCAA AGGTCTCCAG
AAAAAGGTCA CAAGATGA
|
|---|
| Protein sequence | MHQFDWSSIP GALPTLWTGA VVTFKITLLA IVIGIVWGTL LALMRLSGVK PLAWFAQGYV
TVFRSIPLVM VLLWFFLIVP QLLQGVLGLS PTIDIRLASA MVAFSLFEAA YYSEIIRAGI
QAVPRGQVNA AFALGMNYAQ AMRLVILPQA FRAMVPLLLT QAIVLFQDTS LVYVISLADF
FRTAANIGDR DGTSVEMILF AGACYFVVCS VASALVKGLQ KKVTR
|
|---|
| |