| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS668_3375 |
|---|
| Symbol | |
|---|
| ID | 4884830 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia pseudomallei 668 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009074 |
|---|
| Strand | + |
|---|
| Start bp | 3310306 |
|---|
| End bp | 3311193 |
|---|
| Gene Length | 888 bp |
|---|
| Protein Length | 295 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 640129303 |
|---|
| Product | AraC family transcriptional regulator |
|---|
| Protein accession | YP_001060386 |
|---|
| Protein GI | 126440574 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.0121717 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATCGACC GTCTGAAAGA CCTCCTCGCG CGTTTCGAAC TGCACGCCCG CGTATTTCAC
TTCGGTGCGC TGCCCGGCGC GTCGACATTC GAGATTGGCG CGGACGGCTT CCATATGCAC
CTGGTGCGCA CGGGGGCGGT CAACGTGACG GGCGAGGCGC TCGGGCGGCA CGCGGTGCCC
GAGCCGGGCG CGGTGTTCAT CGGGCGCCCC GGCAAGTACC GGATCGAGGC GTGCGGCGAC
GCGCCTGTCG AAGTCTTGTC CGCGGCGATC GAATTCGGGC TCGGCGATGA GAATCCGCTG
TTGCGCGGCT TGCCCGATCT GCTCGCGATT CCGCTTGCGT CGATGTCGCC GCTCGGCGGC
GTCCAGCAGG CGCTCTTCGC GGAAGCGAGC GCGCCCGCGT GCGGGCATGA CACGGTGATC
AACCGGCTGA CCGAGGTGCT CGTCGTGCAG TTGCTGCGCT TCGTGATGCG CAACCGGCTG
GTGGCGAGCG GATCGCTCGC CGGCCTGTCC GACGCGCGGC TCGCGAAGGC GTTGAACGCG
ATGCACGCGG ATCCGGCCCT GCCGTGGTCG CTCGAGCGGA TGGCTGCGAT CGCGGGTATG
TCGCGCTCGC GGTTTGCCGC GCACTTCGCG GGCACGGTCG GCCTGCCGCC CGGCGAATAC
TTGCTCCAAT GGCGCGTGGG GCTCGCGAAG ACGCTGCTCA GGCGCGGCTA TGCGGTGAAG
GAAATCGCGC CGGAAGTCGG CTACGGCAGC GCGAGCGCGC TCACGCGCGC ATTCGCGCAA
TCCACCGGGC AAGCGCCGAC CGATTGGCTC GCGCGGGCGG GCGACGCACC TGGCGCGATC
GGAGCGGCAG CCGATTCGAT GCCGGACGTC GGCGTGCGAG CCGCCTGA
|
|---|
| Protein sequence | MIDRLKDLLA RFELHARVFH FGALPGASTF EIGADGFHMH LVRTGAVNVT GEALGRHAVP
EPGAVFIGRP GKYRIEACGD APVEVLSAAI EFGLGDENPL LRGLPDLLAI PLASMSPLGG
VQQALFAEAS APACGHDTVI NRLTEVLVVQ LLRFVMRNRL VASGSLAGLS DARLAKALNA
MHADPALPWS LERMAAIAGM SRSRFAAHFA GTVGLPPGEY LLQWRVGLAK TLLRRGYAVK
EIAPEVGYGS ASALTRAFAQ STGQAPTDWL ARAGDAPGAI GAAADSMPDV GVRAA
|
|---|
| |