| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS668_3213 |
|---|
| Symbol | kdsA |
|---|
| ID | 4882580 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia pseudomallei 668 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009074 |
|---|
| Strand | - |
|---|
| Start bp | 3143300 |
|---|
| End bp | 3144145 |
|---|
| Gene Length | 846 bp |
|---|
| Protein Length | 281 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 640129141 |
|---|
| Product | 2-dehydro-3-deoxyphosphooctonate aldolase |
|---|
| Protein accession | YP_001060224 |
|---|
| Protein GI | 126439440 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG2877] 3-deoxy-D-manno-octulosonic acid (KDO) 8-phosphate synthase |
|---|
| TIGRFAM ID | [TIGR01362] 3-deoxy-8-phosphooctulonate synthase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 0.771266 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAACGTAG CAATCAGCCC CGGCGTCACG GCCGGCAACA GCCTGCCTTT CGTGCTGTTC
GGCGGGATCA ACGTGCTCGA GAGTCTCGAC TTCACGCTCG ACGTGTGCGG CGAATACGTC
GCGGTGACGC GCAAGCTCGG CATTCCGTTC GTGTTCAAGG CGTCGTTCGA CAAGGCGAAC
CGCTCGTCGA TCCATTCGTA TCGCGGCGTC GGGCTCGACG AAGGCCTGAA GATCTTCGCC
GAGGTGAAGG CGCGCTTCGG CGTGCCGGTG ATCACCGATG TGCACGAAGC CGAGCAGGCG
GCGCCCGTGG CCGAAATCGC CGACGTGTTG CAGGTGCCCG CGTTTCTCGC GCGGCAGACC
GATCTCGTCG TCGCGATCGC GAAGGCCGGC AAGCCGGTGA ACGTGAAGAA GCCGCAGTTC
ATGAGCCCCA CGCAATTGAA GCACGTGGTG TCGAAATGCG GCGAGGTCGG CAACGATCGC
GTGATGCTGT GCGAGCGCGG CAGTTCGTTC GGCTACGACA ATCTCGTCGT GGACATGCTC
GGCTTCCGGC AGATGGCCGA GACGACGGGC GGTTGCCCGG TGATCTTCGA CGTCACGCAC
AGCCTGCAGT GGCGCGATCC GCTCGGCGAC GCGTCGGGCG GCCGGCGCCG GCAAGTGCTC
GATCTCGCGC GCGCGGGCAT CGCGGTCGGC ATCGCGGGGC TCTTTCTCGA GGCGCACCCC
GATCCCGACC GCGCGCGCTG CGATGGGCCG AGCGCGCTGC CGTTGCATCA GCTCGAGGGC
TTCCTGTCGC AGATGAAGGC GATCGACGAT CTCGTCAAGC GCATGCCGGC GCTCGAGATT
CGATGA
|
|---|
| Protein sequence | MNVAISPGVT AGNSLPFVLF GGINVLESLD FTLDVCGEYV AVTRKLGIPF VFKASFDKAN
RSSIHSYRGV GLDEGLKIFA EVKARFGVPV ITDVHEAEQA APVAEIADVL QVPAFLARQT
DLVVAIAKAG KPVNVKKPQF MSPTQLKHVV SKCGEVGNDR VMLCERGSSF GYDNLVVDML
GFRQMAETTG GCPVIFDVTH SLQWRDPLGD ASGGRRRQVL DLARAGIAVG IAGLFLEAHP
DPDRARCDGP SALPLHQLEG FLSQMKAIDD LVKRMPALEI R
|
|---|
| |