Gene BURPS668_3212 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBURPS668_3212 
Symbol 
ID4883654 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia pseudomallei 668 
KingdomBacteria 
Replicon accessionNC_009074 
Strand
Start bp3142752 
End bp3143303 
Gene Length552 bp 
Protein Length183 aa 
Translation table11 
GC content70% 
IMG OID640129140 
Product3-deoxy-D-manno-octulosonate 8-phosphate phosphatase 
Protein accessionYP_001060223 
Protein GI126440124 
COG category[R] General function prediction only 
COG ID[COG1778] Low specificity phosphatase (HAD superfamily) 
TIGRFAM ID[TIGR01662] HAD-superfamily hydrolase, subfamily IIIA
[TIGR01670] 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.659826 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCGCGC CGGCGTATCG CGGTGCGATT CGGCTCGTGC TGTTCGACGT CGACGGCGTG 
CTGACCGACG GGCGGCTGCA TGTGACGGGC GACGGAGAGT GCATGAAGAG CTTCCATGCG
AAGGACGGCA TCGCCGTTGC GCTGCTGCAC GCGCACGGCA TTCGCAGCGG CATTCTGTCG
GGCCGCCACA GCGAGGCGCT CGCATGGCGC GCGCGGCAGC TTGGTTTCGA CGTGTGCGTG
TCGGGCTGCG GCGACAAGCG CGCCGGCTAC GCGCGCATCA AGTCCGAACA GGCGCTCGCG
GACCATGCGA TCGCGTATGT CGGCGACGAC GTCAACGATC TGCCCGTGAT CGACGCGGTC
GGCGTCTCGT ATGCACCCGC CGACGCGCAC GTGCTCGTCA GGCGGCGCGT CGACTACGTC
GTCTCGCGCG CGGGCGGCGA GGGCGCCGCG CGGGAGGTCG CCGAGCACGT GCTGTTGCGC
TCGGGGTTGT CGCTCGACGA CGCATATCGG CCGTTGCTCG ACGAATGGGC CCGGCATGCC
GTCGTCCAAT GA
 
Protein sequence
MSAPAYRGAI RLVLFDVDGV LTDGRLHVTG DGECMKSFHA KDGIAVALLH AHGIRSGILS 
GRHSEALAWR ARQLGFDVCV SGCGDKRAGY ARIKSEQALA DHAIAYVGDD VNDLPVIDAV
GVSYAPADAH VLVRRRVDYV VSRAGGEGAA REVAEHVLLR SGLSLDDAYR PLLDEWARHA
VVQ