Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BURPS668_3212 |
Symbol | |
ID | 4883654 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia pseudomallei 668 |
Kingdom | Bacteria |
Replicon accession | NC_009074 |
Strand | - |
Start bp | 3142752 |
End bp | 3143303 |
Gene Length | 552 bp |
Protein Length | 183 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 640129140 |
Product | 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase |
Protein accession | YP_001060223 |
Protein GI | 126440124 |
COG category | [R] General function prediction only |
COG ID | [COG1778] Low specificity phosphatase (HAD superfamily) |
TIGRFAM ID | [TIGR01662] HAD-superfamily hydrolase, subfamily IIIA [TIGR01670] 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 0.659826 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCGCGC CGGCGTATCG CGGTGCGATT CGGCTCGTGC TGTTCGACGT CGACGGCGTG CTGACCGACG GGCGGCTGCA TGTGACGGGC GACGGAGAGT GCATGAAGAG CTTCCATGCG AAGGACGGCA TCGCCGTTGC GCTGCTGCAC GCGCACGGCA TTCGCAGCGG CATTCTGTCG GGCCGCCACA GCGAGGCGCT CGCATGGCGC GCGCGGCAGC TTGGTTTCGA CGTGTGCGTG TCGGGCTGCG GCGACAAGCG CGCCGGCTAC GCGCGCATCA AGTCCGAACA GGCGCTCGCG GACCATGCGA TCGCGTATGT CGGCGACGAC GTCAACGATC TGCCCGTGAT CGACGCGGTC GGCGTCTCGT ATGCACCCGC CGACGCGCAC GTGCTCGTCA GGCGGCGCGT CGACTACGTC GTCTCGCGCG CGGGCGGCGA GGGCGCCGCG CGGGAGGTCG CCGAGCACGT GCTGTTGCGC TCGGGGTTGT CGCTCGACGA CGCATATCGG CCGTTGCTCG ACGAATGGGC CCGGCATGCC GTCGTCCAAT GA
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Protein sequence | MSAPAYRGAI RLVLFDVDGV LTDGRLHVTG DGECMKSFHA KDGIAVALLH AHGIRSGILS GRHSEALAWR ARQLGFDVCV SGCGDKRAGY ARIKSEQALA DHAIAYVGDD VNDLPVIDAV GVSYAPADAH VLVRRRVDYV VSRAGGEGAA REVAEHVLLR SGLSLDDAYR PLLDEWARHA VVQ
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