Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BURPS668_3204 |
Symbol | opcL |
ID | 4882184 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia pseudomallei 668 |
Kingdom | Bacteria |
Replicon accession | NC_009074 |
Strand | + |
Start bp | 3137583 |
End bp | 3138095 |
Gene Length | 513 bp |
Protein Length | 170 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 640129132 |
Product | peptidoglycan-associated outer-membrane lipoprotein |
Protein accession | YP_001060216 |
Protein GI | 126440722 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins |
TIGRFAM ID | [TIGR02802] peptidoglycan-associated lipoprotein |
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Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATGTCGA AGAAACTTCG TCTGGCGTTC GCGATGCTGA TGATCGGCGC GCTCGCGGCA TGCAAGTCGG GCGTGAAGCT CGACGAGCAC GCGAACCAGG GCGACGCGGT CAGCACGCAA CCGAATCCCG AAAACGTCGC GCAGGTGACC GTCGATCCGC TGAACGATCC GAACAGCCCG CTCGCGAAGC GCAGCGTGTA CTTCGATTTC GACAGCTACT CGGTGCAGGA CCAATACCAG GCGCTGCTGC AGCAACACGC GCAATACCTG AAGAGCCATC CGCAACGCCA CATCCTGATC CAGGGCAACA CCGACGAGCG CGGCACGAGC GAGTACAACC TCGCGCTCGG CCAAAAGCGT GCGGAAGCCG TGCGCCGCGC GCTGTCGCTG CTCGGCGTCG GGGATGCGCA GATGGAAGCC GTGAGTCTCG GCAAGGAAAA GCCGGTTGCG CTCGGCCACG ACGAAGCGTC GTGGGCGCAG AACCGCCGTG CGGACCTCGT CTATCAACAG TAA
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Protein sequence | MMSKKLRLAF AMLMIGALAA CKSGVKLDEH ANQGDAVSTQ PNPENVAQVT VDPLNDPNSP LAKRSVYFDF DSYSVQDQYQ ALLQQHAQYL KSHPQRHILI QGNTDERGTS EYNLALGQKR AEAVRRALSL LGVGDAQMEA VSLGKEKPVA LGHDEASWAQ NRRADLVYQQ
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