| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS668_3174 |
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| Symbol | hmgA |
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| ID | 4883711 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia pseudomallei 668 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009074 |
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| Strand | - |
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| Start bp | 3114580 |
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| End bp | 3115914 |
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| Gene Length | 1335 bp |
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| Protein Length | 444 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640129102 |
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| Product | homogentisate 1,2-dioxygenase |
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| Protein accession | YP_001060186 |
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| Protein GI | 126440702 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG3508] Homogentisate 1,2-dioxygenase |
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| TIGRFAM ID | [TIGR01015] homogentisate 1,2-dioxygenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.666135 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACATTGG ATTTTTCGAA ACCGGGCGAA GCCGGCTATC AGAGCGGCTT CGCGAACGAA
TTCGCGACCG AGGCGCTGCC GGGCGCGTTG CCGCACGCGC GCAACTCGCC GCAGCGCGCG
CCGTACGGGC TCTACGCGGA GCAGTTCTCC GGCACCGCGT TCACTGCGCC GCGCGGCCAC
AACCGCCGCT CGTGGCTGTA CCGGATCCGG CCCGCCGCCG TGCATCGGCC GTTCGAGCTC
GTGTCGGGCG AGCGCCGGAT CGTCGCCGAG TTCGGCGATT CGGACGACGT GCCGCCGACG
CCGCCGAACC AGTTGCGCTG GGATCCGCTG CCGATGCCCG CGCAGCCGAC CGATTTCGTC
GACGGCTGGG TGACGATGGC GGGCAACGGC TCGGCTGCCG CGATGAGCGG CTGCGCGATC
CACCTGTACG CGGCGAACCG CTCGATGCGC GAGCGCTTCT TCTACAGCGC GGACGGCGAG
CTGCTGATCG TGCCGCAGGA AGGGCGCCTC TTCATCATGA CGGAGCTCGG CCGGCTCGAC
GTCGAGCCGT TCGAGATCGC GGTGATCCCG CGCGGCGTGC GCTTCGCGGT CGCGCTGCCG
GACGGGCGCG CGCGCGGCTA TGTATGCGAG AACTTCGGTG CGCTGCTCAG GCTGCCGGAC
CTCGGGCCGA TCGGCTCGAA CGGCCTCGCG AATCCGCGCG ACTTCCTCAC GCCGCACGCG
TCGTACGAGG ATCGCGAAGG CGCGTTCGAG CTCGTCGCGA AGCTGAATGG CCGGCTCTGG
CGCGCGGACA TCGATCATTC GCCGTTCGAC GTCGTCGCGT GGCACGGCAA CTACGCGCCG
TACAAGTACG ACCTGCGCCA CTTCAACACG ATCGGCTCGA TCAGCTACGA TCATCCGGAC
CCGTCGATCT TCCTCGTGCT GCAGTCGCAA AGCGATACGC CGGGCGTCGA CGCGATCGAC
TTCGTGATCT TCCCGCCGCG CTGGCTCGCG GCCGAGGATA CGTTCCGCCC GCCTTGGTTC
CACCGCAACG TCGCGAGCGA ATTCATGGGG CTCGTGCACG GCGTCTACGA CGCGAAGGCC
GAAGGCTTCG TGCCGGGCGG CGCGAGCCTG CACAACTGCA TGTCCGGCCA CGGGCCCGAC
GCGGACACGT TCGAGAAGGC TTCTTCGATC GACACGTCGA AGCCGAACAA GGTCGGCGAC
ACGATGGCGT TCATGTTCGA GACCCGCACG CTGATCCGGC CGACGCGCTT CGCGCTCGAC
ACCGCGCAAC TGCAGGCGAA CTACTTCGAA TGCTGGCAAG GCCTCAAGAA ACACTTCAAT
CCGGAGCAAC GATGA
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| Protein sequence | MTLDFSKPGE AGYQSGFANE FATEALPGAL PHARNSPQRA PYGLYAEQFS GTAFTAPRGH
NRRSWLYRIR PAAVHRPFEL VSGERRIVAE FGDSDDVPPT PPNQLRWDPL PMPAQPTDFV
DGWVTMAGNG SAAAMSGCAI HLYAANRSMR ERFFYSADGE LLIVPQEGRL FIMTELGRLD
VEPFEIAVIP RGVRFAVALP DGRARGYVCE NFGALLRLPD LGPIGSNGLA NPRDFLTPHA
SYEDREGAFE LVAKLNGRLW RADIDHSPFD VVAWHGNYAP YKYDLRHFNT IGSISYDHPD
PSIFLVLQSQ SDTPGVDAID FVIFPPRWLA AEDTFRPPWF HRNVASEFMG LVHGVYDAKA
EGFVPGGASL HNCMSGHGPD ADTFEKASSI DTSKPNKVGD TMAFMFETRT LIRPTRFALD
TAQLQANYFE CWQGLKKHFN PEQR
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