Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BURPS668_3170 |
Symbol | araJ |
ID | 4882657 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia pseudomallei 668 |
Kingdom | Bacteria |
Replicon accession | NC_009074 |
Strand | + |
Start bp | 3110241 |
End bp | 3111410 |
Gene Length | 1170 bp |
Protein Length | 389 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 640129098 |
Product | inner membrane transport protein YdhP |
Protein accession | YP_001060182 |
Protein GI | 126440746 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.0159821 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCACTGC CTCTGTTTGC CCTTGCCGTT GCCGCGTTTG GCATCGGTAC CACCGAGTTC GTCATCATGG GACTCCTGCC GAATGTCGCG CGCGATCTGG GCGTGTCGAT TCCGGCGGCG GGCATGCTCG TGTCCGGCTA TGCGCTCGGC GTGACGATCG GCGCGCCGAT CCTCGCCGTC GTCACCGCGA AAATGCCGCG CAAGGCGGCG CTGCTCGCGC TGATCGGCGT GTTCATCGTC GGTAATCTGT TTTGCGCGAT CGCGCCCGGC TACGCGACGC TGATGGTCGC GCGCGTCGTC ACCGCGTTCT GCCACGGCGC GTTCTTCGGC ATCGGCTCGG TGGTCGCGAG CAACCTCGTT GCGCCGAACA AGCGCGCGCA GGCGATCGCG CTGATGTTCA CCGGCCTCAC GCTCGCGAAC GTGCTCGGCG TGCCGCTCGG CACCGCGCTC GGCCAGGCGT TCGGCTGGCG CGCGACGTTC TGGGCCGTCA CCGGCATCGG CGCGCTCGCC GCGGCGGCGC TCGCCTTCTG CGTGCCGAAG CGCCTCGAGA TGCCCGCGGC CGGCATCGCG CGCGAGTTCG GCGTGCTGCG CAACCCGCAG GTGCTGATGG TGCTCGGCAT CAGCGTGCTC GCGTCGGCGA GCCTCTTCAC CGTGTTCACG TACATCGCGC CGATCCTCGA GGACGTGACG GGCTTCACGC CGCACGACGT CACGCTCGTG CTGCTGCTGT TCGGCCTCGG GCTGACGGTC GGCGGCACCG TCGGCGGCAA GCTCGCCGAC TGGCGGCGGA TGCCGTCGCT CGTCGCGACG CTCGCATCGA TCGGCGTCGT GCTCGCCGCG TTCGCGGGCA CGATGCGCAC ACCGCTGCCC GCGCTCGTGA CGATTTTCGT GTGGGGCGTG CTCGCGTTCG CGATCGTGCC GCCGCTGCAG ATCCTGATCG TCGATCGCGC GAGCCACGCG CCGAATCTCG CGTCGACGCT CAACCAGGGC GCGTTCAATC TCGGCAACGC GCTCGGCGCG TGGCTCGGCG GCACCGCGAT CCACGCGGGC GTGCCGCTCG CGAAACTGCC GTGGGCGGGC GCCGCGCTCG CGATGGCCGC GCTCGCGCTC ACGCTGTGGT CCGCATCGCT CGAGCGGCGT GCGGTTCCGG GGCCGGCCGG ATGCGCGTGA
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Protein sequence | MPLPLFALAV AAFGIGTTEF VIMGLLPNVA RDLGVSIPAA GMLVSGYALG VTIGAPILAV VTAKMPRKAA LLALIGVFIV GNLFCAIAPG YATLMVARVV TAFCHGAFFG IGSVVASNLV APNKRAQAIA LMFTGLTLAN VLGVPLGTAL GQAFGWRATF WAVTGIGALA AAALAFCVPK RLEMPAAGIA REFGVLRNPQ VLMVLGISVL ASASLFTVFT YIAPILEDVT GFTPHDVTLV LLLFGLGLTV GGTVGGKLAD WRRMPSLVAT LASIGVVLAA FAGTMRTPLP ALVTIFVWGV LAFAIVPPLQ ILIVDRASHA PNLASTLNQG AFNLGNALGA WLGGTAIHAG VPLAKLPWAG AALAMAALAL TLWSASLERR AVPGPAGCA
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