Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BURPS668_3082 |
Symbol | rfaC |
ID | 4884336 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia pseudomallei 668 |
Kingdom | Bacteria |
Replicon accession | NC_009074 |
Strand | - |
Start bp | 3022545 |
End bp | 3023540 |
Gene Length | 996 bp |
Protein Length | 331 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 640129010 |
Product | lipopolysaccharide heptosyltransferase I |
Protein accession | YP_001060094 |
Protein GI | 126439635 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0859] ADP-heptose:LPS heptosyltransferase |
TIGRFAM ID | [TIGR02193] lipopolysaccharide heptosyltransferase I |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGCAAAAAA TTCTGATCGT GCGCGTGTCG TCGCTCGGCG ATGTCGTGCA TAACATGCCG GTGATCGCCG ATATCCGCCG GCGTCACCCC GATGCGCAGA TCGACTGGCT CGTCGAGGAA GGCTTCGCCG ATCTCGTGCG GCTCGTCGAC GGTGTGCGCG ACGTGCTGCC GTTCTCGCTG CGGCGCTGGC GCAAGCGCTT GAGCGCATCG CAAACGTGGC GCGAGATCCG CGCGTTCCGG CGGCGCCTCG CCGAGGAGCG CTACGACCTC GTGATCGACT GCCAGGGGCT CATCAAGACC GCGTGGGTCG CGAGCTGGGC GCGCGGGCCG CTTGTCGGCC TCGGCAACCG CACCGACGGC GCCGGCTACG AGTGGCCGGT GCGCTTCTTC TACGACAGGC GGGTGCCGAT CGCGCCGCGC ACGCACGTCG TCGAGCGCTC GCGGCAGCTC GTCGCGGCGG CGCTGGGAGA CCCCGCGCCG GCGCCCGGCG AGCCGATCGA TTTCGGCCTC GACACGCATG GCGCGGCGCG CGCGCTCGCG GCGCTCGATT TGAATCTGCC GGTGCCCTAC GTGGTATTCG TGCACGCGAC CTCGCGCGCC GACAAGCAGT GGCCCGACGA AGCGTGGACC GGCCTCGGCG AGGCGCTCGT GCGGCGCGGC GCGTCGCTCG TGCTGCCGTG GGGCAGCGAC GCCGAGCGCG CGACGAGCGA GCGCCTCGCG AAGGCGTTCG GCGCGGCGGC GATCGTGCCG CCGAAGCTGT CGCTGCCCGC GGTCGTCGGC CTCGTCGACG GCGCGGCGGC GACGGTCGGC GTCGATACCG GCCTCGTCCA CATCGCGGCG GCGCTCAAGC GTCCGACCGT CGAACTGTAC AATTTCGCGA CAGCCTGGCG CACGGGCGGC TACTGGTCGC CCAACGTCGT CAATCTCGGC ACCGCCGGCG CGCCGCCGTC CCTTTCGCAG GCGAAGGACG CACTCGCGTC GTTCGGCCTC TTGTAA
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Protein sequence | MQKILIVRVS SLGDVVHNMP VIADIRRRHP DAQIDWLVEE GFADLVRLVD GVRDVLPFSL RRWRKRLSAS QTWREIRAFR RRLAEERYDL VIDCQGLIKT AWVASWARGP LVGLGNRTDG AGYEWPVRFF YDRRVPIAPR THVVERSRQL VAAALGDPAP APGEPIDFGL DTHGAARALA ALDLNLPVPY VVFVHATSRA DKQWPDEAWT GLGEALVRRG ASLVLPWGSD AERATSERLA KAFGAAAIVP PKLSLPAVVG LVDGAAATVG VDTGLVHIAA ALKRPTVELY NFATAWRTGG YWSPNVVNLG TAGAPPSLSQ AKDALASFGL L
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