Gene BURPS668_3082 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBURPS668_3082 
SymbolrfaC 
ID4884336 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia pseudomallei 668 
KingdomBacteria 
Replicon accessionNC_009074 
Strand
Start bp3022545 
End bp3023540 
Gene Length996 bp 
Protein Length331 aa 
Translation table11 
GC content72% 
IMG OID640129010 
Productlipopolysaccharide heptosyltransferase I 
Protein accessionYP_001060094 
Protein GI126439635 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0859] ADP-heptose:LPS heptosyltransferase 
TIGRFAM ID[TIGR02193] lipopolysaccharide heptosyltransferase I 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCAAAAAA TTCTGATCGT GCGCGTGTCG TCGCTCGGCG ATGTCGTGCA TAACATGCCG 
GTGATCGCCG ATATCCGCCG GCGTCACCCC GATGCGCAGA TCGACTGGCT CGTCGAGGAA
GGCTTCGCCG ATCTCGTGCG GCTCGTCGAC GGTGTGCGCG ACGTGCTGCC GTTCTCGCTG
CGGCGCTGGC GCAAGCGCTT GAGCGCATCG CAAACGTGGC GCGAGATCCG CGCGTTCCGG
CGGCGCCTCG CCGAGGAGCG CTACGACCTC GTGATCGACT GCCAGGGGCT CATCAAGACC
GCGTGGGTCG CGAGCTGGGC GCGCGGGCCG CTTGTCGGCC TCGGCAACCG CACCGACGGC
GCCGGCTACG AGTGGCCGGT GCGCTTCTTC TACGACAGGC GGGTGCCGAT CGCGCCGCGC
ACGCACGTCG TCGAGCGCTC GCGGCAGCTC GTCGCGGCGG CGCTGGGAGA CCCCGCGCCG
GCGCCCGGCG AGCCGATCGA TTTCGGCCTC GACACGCATG GCGCGGCGCG CGCGCTCGCG
GCGCTCGATT TGAATCTGCC GGTGCCCTAC GTGGTATTCG TGCACGCGAC CTCGCGCGCC
GACAAGCAGT GGCCCGACGA AGCGTGGACC GGCCTCGGCG AGGCGCTCGT GCGGCGCGGC
GCGTCGCTCG TGCTGCCGTG GGGCAGCGAC GCCGAGCGCG CGACGAGCGA GCGCCTCGCG
AAGGCGTTCG GCGCGGCGGC GATCGTGCCG CCGAAGCTGT CGCTGCCCGC GGTCGTCGGC
CTCGTCGACG GCGCGGCGGC GACGGTCGGC GTCGATACCG GCCTCGTCCA CATCGCGGCG
GCGCTCAAGC GTCCGACCGT CGAACTGTAC AATTTCGCGA CAGCCTGGCG CACGGGCGGC
TACTGGTCGC CCAACGTCGT CAATCTCGGC ACCGCCGGCG CGCCGCCGTC CCTTTCGCAG
GCGAAGGACG CACTCGCGTC GTTCGGCCTC TTGTAA
 
Protein sequence
MQKILIVRVS SLGDVVHNMP VIADIRRRHP DAQIDWLVEE GFADLVRLVD GVRDVLPFSL 
RRWRKRLSAS QTWREIRAFR RRLAEERYDL VIDCQGLIKT AWVASWARGP LVGLGNRTDG
AGYEWPVRFF YDRRVPIAPR THVVERSRQL VAAALGDPAP APGEPIDFGL DTHGAARALA
ALDLNLPVPY VVFVHATSRA DKQWPDEAWT GLGEALVRRG ASLVLPWGSD AERATSERLA
KAFGAAAIVP PKLSLPAVVG LVDGAAATVG VDTGLVHIAA ALKRPTVELY NFATAWRTGG
YWSPNVVNLG TAGAPPSLSQ AKDALASFGL L