| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS668_3067 |
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| Symbol | |
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| ID | 4883823 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia pseudomallei 668 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009074 |
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| Strand | + |
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| Start bp | 3008433 |
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| End bp | 3009740 |
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| Gene Length | 1308 bp |
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| Protein Length | 435 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640128995 |
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| Product | putative amino acid ABC transporter, periplasmic amino acid-binding protein |
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| Protein accession | YP_001060079 |
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| Protein GI | 126438928 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
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| TIGRFAM ID | [TIGR03407] urea ABC transporter, urea binding protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.656729 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAACGTC GCAGTCTTTT GAAGTTCGGA TCGATGGCAG GCGTCATGGC GCTCGCGGGG
CAAAGCCCCG TCGCGCGCGC GGCGGATTCG GGCAAAGGCC CGATCAAGGT CGGCATCCTG
CATTCGCTGT CGGGCACGAT GGCGATCTCC GAGACTTCGC TCAAGGACAC CGCGCTGATG
ACGATCGCCG ACATCAACAA GAACGGCGGC GTGCTCGGGC GGCCGCTGCA GCCCGTCGTC
GTCGATCCCG CGTCGAACTG GCCGCTGTTC GCCGAGAAGG CGCGCCAGTT GCTCACGCAG
GAGAAGGTCG CATGCGTGTT CGGCTGCTGG ACGTCGGTGT CGCGCAAGTC GGTGCTGCCC
GTGTTCGAGG AGCTGAACGG CCTGCTCTAC TACCCGGTGC AGTACGAGGG CGAGGAGATG
TCGCGCAACG TGTTCTACAC GGGCGCCGCG CCGAACCAGC AGGCGATTCC GGCCGTCGAG
TACATGATGA GCGCCGAAGG CGGCGGCGCG AAGCGCTTCT TCCTGCTCGG CACCGATTAC
GTCTACCCGC GCACGACCAA CAAGATCCTG CGCGCGTTCC TGAAATCGAA GGGCGTGAAA
GATTCCGATA TTCAGGAAGT CTACACACCG TTCGGGCACA GCGATTACCA GACGATCGTC
GCGAACATCA AGACCTTCGC GCAAGGCGGC AAGACCACCG TGATCTCGAC GATCAACGGC
GATTCGAACG TGCCGTTCTA CAAGGAGCTC GGCAATCAGG GGCTCAAGGC GACCGACGTG
CCCGTCGTCG CGTTCTCGGT CGGCGAGGAG GAACTGCGCG GCATCGACAC GAAGCCGCTC
GTCGGGCATC TGGCCGCGTG GAATTACTTC ATGTCGGTGA AGGGGCCGGC GAACGCGAAG
TTCAAGGAGC AGTTCGCCGC GTGGGTGAAG TCGCAGAATC TGCCGGGCGG CGCGAAGCGC
GTGACCAACG ATCCGATGGA GGCGACGTTC GTCGGCATCC ACATGTGGAA GCAGGCGGTC
GAGAAGGCGA AGAGCACCGA TGTCGACCGC GTGCGCACGG CGATGATCGG CCAGAGCGTC
GCCGCGCCGT CGGGCTTCAC ACTGACGATG GACGGCAACC ATCATCTGCA CAAGCCGGTG
ATGATCGGCG AGATTCGCGG CGACGGCCAG TTCAACGTCG TCTGGAAAAC GAAGACGGCG
ATTCGCGCGC AGCCGTGGAG CCCGTTCATC GCGGGCAACC AGGGCAAGCC GGACGTGGTC
GGCTCGATTC CGGAGTTCCT GCGCCGCCGT CGCGCCGCGC TCGCCTGA
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| Protein sequence | MKRRSLLKFG SMAGVMALAG QSPVARAADS GKGPIKVGIL HSLSGTMAIS ETSLKDTALM
TIADINKNGG VLGRPLQPVV VDPASNWPLF AEKARQLLTQ EKVACVFGCW TSVSRKSVLP
VFEELNGLLY YPVQYEGEEM SRNVFYTGAA PNQQAIPAVE YMMSAEGGGA KRFFLLGTDY
VYPRTTNKIL RAFLKSKGVK DSDIQEVYTP FGHSDYQTIV ANIKTFAQGG KTTVISTING
DSNVPFYKEL GNQGLKATDV PVVAFSVGEE ELRGIDTKPL VGHLAAWNYF MSVKGPANAK
FKEQFAAWVK SQNLPGGAKR VTNDPMEATF VGIHMWKQAV EKAKSTDVDR VRTAMIGQSV
AAPSGFTLTM DGNHHLHKPV MIGEIRGDGQ FNVVWKTKTA IRAQPWSPFI AGNQGKPDVV
GSIPEFLRRR RAALA
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