Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BURPS668_3065 |
Symbol | aptA |
ID | 4881706 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia pseudomallei 668 |
Kingdom | Bacteria |
Replicon accession | NC_009074 |
Strand | - |
Start bp | 3006751 |
End bp | 3008079 |
Gene Length | 1329 bp |
Protein Length | 442 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 640128993 |
Product | omega amino acid--pyruvate transaminase |
Protein accession | YP_001060077 |
Protein GI | 126439028 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0161] Adenosylmethionine-8-amino-7-oxononanoate aminotransferase |
TIGRFAM ID | [TIGR00508] adenosylmethionine-8-amino-7-oxononanoate transaminase |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.786576 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCGAGC ACGTTTCGCA GACCCCCGAT CTCTCCGCGT TCTGGATGCC GTTCACCGCG AACCGGCAGT TCAAGGAAGC GCCGCGCCTG CTCGTCGCGG CGAAGGGGAT GTACTACACG TCGCACGACG GCCGGCGCAT TCTCGACGGC ACCGCGGGCC TCTGGTGCGT GAACGCGGGG CACGGGCGCG ACGAGATCGT CGCCGCGGTG CGGGCGCAGG CCGAGGAGAT GGATTTCGCG CCGACGTTCC AGATGGGGCA CCCGAAGGCG TTCGAGGCCG CGACGAAGAT CGCGCGCCAC ACGCCGGGCG ACCTGAAACA CATCTTCTTC ACGAATTCCG GCTCGGAGGC GGTCGACACC GCGCTGAAGA TCGCGCTCGC GTATCACCGC GCGCGCGGCG AAGGGCAGCG CACGCGCTTC ATCGGCCGCG AGCGCGGCTA TCACGGCGTC GGCTTCGGCG GCATCTCGGT GGGCGGCATC GCGCCGAACC GCAACGCGTA TTCGGGCGCG CTGCTGCCGT CGGTCGACCA TCTGCCGCAT ACGCTGAACC TGAAGGAGGC CGCGTTCTCG AAGGGGCAGC CCGCGTGGGG CGCGCAGCTG GCGGACGAAC TGGAGCGGCT CGTCGCGCTG CACGACGCAT CGACGATCGC CGCGGTGATC GTCGAGCCCG TCGCCGGCTC GACGGGCGTG CTGATCCCGC CGCGAGGCTA TCTCGAACGC TTGCGCGAAC TGTGCGACAA GCACGGCATC CTGCTGATCT TCGACGAAGT GATCACCGGC TGGGGGCGGC TCGGCGCGCC GTTCGCGGCG CAGTTCTTCG GCGTGACGCC CGATCTGCTG ACGATGGCCA AAGGCACGAA CAACGCGGCG GTGCCGATGG GCGCGGTGGC GGCGAGCGGC GCGATTCACG ACGCGATCGT CGGCGGCGCG CCGGCCGGCA TCGAGCTGTT TCACGGCTAC ACGTATTCGG GGCACCCGCT CGCGGCGGCG GCTGCCGTCG CGACGATCGA TCTGTACGAA CGCGAAGGGC TCCTCACGCG CGCCGCGCGG ATCGCGCCGC TCTTCGAGCG CGAGATCCAC AAGCTGAAGG ACGCGCGCCA CGTGATCGAC GTGCGCAATC TCGGCCTCGT CGGCGGCGTC GAGTTGAAGC CGCGTGACGG CAAGCCGGGC GCGCGCGCCT ACGAAGTCTT CGTCAAGTGC TTCGAGAAGG GCGCGATGAT CCGCTACACG GGCGACATCC TCGCGTTCTC GCCGCCCCTC ATCGTCGAGG AGGCGCAGAT CGTCGAGCTG TTCTCGATCG TCGCGCAGGC GCTGAAGGAA ACGGAGTAG
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Protein sequence | MTEHVSQTPD LSAFWMPFTA NRQFKEAPRL LVAAKGMYYT SHDGRRILDG TAGLWCVNAG HGRDEIVAAV RAQAEEMDFA PTFQMGHPKA FEAATKIARH TPGDLKHIFF TNSGSEAVDT ALKIALAYHR ARGEGQRTRF IGRERGYHGV GFGGISVGGI APNRNAYSGA LLPSVDHLPH TLNLKEAAFS KGQPAWGAQL ADELERLVAL HDASTIAAVI VEPVAGSTGV LIPPRGYLER LRELCDKHGI LLIFDEVITG WGRLGAPFAA QFFGVTPDLL TMAKGTNNAA VPMGAVAASG AIHDAIVGGA PAGIELFHGY TYSGHPLAAA AAVATIDLYE REGLLTRAAR IAPLFEREIH KLKDARHVID VRNLGLVGGV ELKPRDGKPG ARAYEVFVKC FEKGAMIRYT GDILAFSPPL IVEEAQIVEL FSIVAQALKE TE
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