Gene BURPS668_3013 details

Gene Information

• Locus tag: BURPS668_3013
• Symbol: ribE
• ID: 4882617
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Burkholderia pseudomallei 668
• Kingdom: Bacteria
• Replicon accession: NC_009074
• Strand: +
• Start bp: 2958994
• End bp: 2959608
• Gene Length: 615 bp
• Protein Length: 204 aa
• Translation table: 11
• GC content: 67%
• IMG OID: 640128941
• Product: riboflavin synthase subunit alpha
• Protein accession: YP_001060026
• Protein GI: 126441416
• COG category: [H] Coenzyme transport and metabolism
• COG ID: [COG0307] Riboflavin synthase alpha chain
• TIGRFAM ID: [TIGR00187] riboflavin synthase, alpha subunit

Plasmid Coverage information

• Num covering plasmid clones: 30
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTTTACCG GAATCGTCGC GGCGGTCGGC CGCATCGAAG CGATCACGCC GATCGCCGCC 
TCGCCCGATG CGGGCGTGCG CCTCACGCTG CGCGCAGGCG GGCTCGACCT CGCCGATGTC 
GCGCTCGGCG ACAGCATCGC GATCCAGGGC GCGTGCATGA CGGTCGTCGC GAAGACGGCC 
GACACGTTCG ACGTCGAGGT GTCGCGCGAA AGCCTGAACA GGACGGTCGG CCTCGCCGAG 
CCGGGCGACG TGAATCTTGA AAAGGCGCTG CGCGCGCACG ACCGGCTGGG CGGCCACATC 
GTGTCCGGGC ACGTCGACGG GCTCGGCACC GTCACGCGCT TCGCGCCCGT GGGCGAATCG 
CACGAACTGC GCGTGCTCGC GCCGCGCGAG CTCGGCCGCT ATCTCGCGTA CAAGGGCTCG 
ATCACCGTCA ACGGCGTGAG CCTCACCGTC AATTCGGTCG ACGACCGCGA CGACGGCTGC 
GAATTCTCGA TCAACCTGAT TCCTCATACG GTCGAAGTGA CGACGCTGCG GCACCTGACG 
GCCGGCGCGA AGGTCAATCT CGAGATCGAC ATGATCGCGC GGTATGTGGA GCGGATGACG 
AACGCACCAA AATAA 

 

Protein sequence

MFTGIVAAVG RIEAITPIAA SPDAGVRLTL RAGGLDLADV ALGDSIAIQG ACMTVVAKTA 
DTFDVEVSRE SLNRTVGLAE PGDVNLEKAL RAHDRLGGHI VSGHVDGLGT VTRFAPVGES 
HELRVLAPRE LGRYLAYKGS ITVNGVSLTV NSVDDRDDGC EFSINLIPHT VEVTTLRHLT 
AGAKVNLEID MIARYVERMT NAPK