| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS668_2923 |
|---|
| Symbol | metE |
|---|
| ID | 4883667 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia pseudomallei 668 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009074 |
|---|
| Strand | - |
|---|
| Start bp | 2882397 |
|---|
| End bp | 2884691 |
|---|
| Gene Length | 2295 bp |
|---|
| Protein Length | 764 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 640128851 |
|---|
| Product | 5-methyltetrahydropteroyltriglutamate-- homocysteine S-methyltransferase |
|---|
| Protein accession | YP_001059941 |
|---|
| Protein GI | 126441841 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0620] Methionine synthase II (cobalamin-independent) |
|---|
| TIGRFAM ID | [TIGR01371] 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCACCG CACACATCCT GGGTTTTCCG CGCATCGGCG CGCAACGGGA ACTGAAGTTC
GCCCTCGAGC GCTACTGGCG CGACGGCGCG TCGGCCGACG CCGAGCGCGC GCTCGTCGAT
ACCGGCCGCG CGCTGCGCGC CGAGCACTGG CGCATTGAGC GCGACGCCGG CCTCGACTGC
GTGACGGTCG GCGATTTCGC GTGGTACGAC CACGTGCTGA CGACGCTCGC GCACGTCGGC
GGCCTGCCGC GGCGTTTCGG CTTCGACGCG CACGCGCTCA CGCTCGCCGA CTATTTCGCG
GCTGCGCGCG GCAACGCCGC GCAGCCGGCG ATGGAGATGA CGAAGTGGTT CGATACGAAC
TATCACTACC TCGTGCCCGA GTACTCGCCC GCGACGACGT TCGGGCCGGG CGTCGAGTGG
CTCTTCGACG AGGTGCGCGA GGCGCGCGCG CTCGGCCATC GCGCGAAGGC GGCGCTCGTC
GGCCCGCTTA CGCTGCTCTG GCTAGGCAAG GCGCGCGACG GGCTCGTCGA GCGCCTCGCG
CTGCTGCCGC GCCTCGTGCC CGCGTATCGC GCGCTGCTCG CGCGGCTGAG GGAAGCGGGC
GTCGACTGGG TGCAGATCGA CGAGCCGATC TTCTCGCTCG ATCTGCCCGA CGCGTGGCGC
GACGCGGCGC GGCCGACGTA CGAAGCGCTC GCGCCCGGCG CGCCGAAGCT GCTCGTCGCG
ACGTATTTCG ACGACGCGAG CGAGCACGCG GCGCTGCTCA AGGCGCTGCC CGTCGCGGGC
CTGCACATCG ATCTCGTGCG CGCCGACGCG CAGCTCGATG CGTTCGTCGC GGACTATCCG
GCCGACAAGG TGCTCTCGTG CGGCATCGTC GACGGCCGCA ACGTGTGGCG CAACGATCTC
GACCGTTCGC TCGCGCGGCT CGCGCCGGTG CGCGACGCGC TCGGCGAGCG GCTGTGGGTC
GCGACGAGCT GCTCGCTGCT GCATGTGCCC GTCGATCTCG CGCATGAGCC GAGGCTCGAC
GAGGAGCTGA AGACTTGGCT CGCGTTCGCG GCGCAGAAGA CGCGCGAGGT CGCCGCGCTG
CGCGACGCGC TCGTGAAGGG GCGCGCGGCG GTCGCGGCCG AGTTCGATGA CGCCGCCGCG
GCGGCGGCCG CGCGGCGCAC GTCGGCGCGC ATTCACAATC CGCTCGTCAA GCGCCGCGTC
GCGGCGCTGA CCGACGCCGA CGCGCGCCGC GCGAGCACCT ATAGCGTGCG TGCGGCCGCG
CAGCGCGCGC GCTTCGGCTT GCCGCTGCTG CCGACGACGA CGATCGGCTC GTTTCCGCAG
ACGCCGGAGA TTCGCCGCGC GCGCGCCGCG TTCAAGCAGG GCGTGCTCGA TCACCTCGGC
TATCTGGAGG CGATGCGCGA GCAGGTGCGC ATCGCGATCG ACAAGCAGCT CGCGTACGGC
CTCGACGTGC TCGTGCACGG CGAGGCCGAG CGCAACGACA TGGTCGAATA CTTCGGCGAA
CTGCTGTGGG GCTTCGCGAT CACGAGCAAC GGCTGGGTCC AGAGCTACGG TTCGCGCTGC
GTGAAGCCGC CCCTCGTTTA TGGCGACGTG TATTTGCCGG AGCCGATGAC GGTCGGCTGG
GCGTCGTATG CGCAGAGCCT GAGCGCGAAG CCGGTGAAGG GCATGCTGAC GGGGCCCGTG
ACGATGCTGC AATGGTCGTT CGTGCGCGAC GACCAGCCGC GCGCGACGAC GGCCTTGCAG
ATCGCGCTCG CGCTGCGGCA GGAGACGCTC GACCTCGAGA AGGCCGGCAT CGGGATGATC
CAGATCGACG AGCCGGCGCT GCGCGAGGGG TTGCCGCTGA AGGCGCGCGA GCGCGCCGCG
TATCTGGACT GGGCGGTGCG CGCGTTCGGG ATCGCGGCGT CGGGCGTCGC GGACGACACG
CAGATCCACA CGCACATGTG CTATTCGGAG TTCGGCGACA TCCTGCCGTC GATCGCGGCG
CTCGACGCGG ACGTGATCTC GATCGAGACG ACCCGCTCGA ACATGGAACT GCTCGACGCG
TTCGAGACGT TCGACTATCC GAACGAGATC GGGCCGGGCG TCTATGACAT CCATTCGCCG
CGCGTGCCGG ACGCGGACGA GATCGAGCGG CTCATCCTGC TCGCGCTCGA GCGGATTCCG
GCGCAGCGCC TGTGGGTGAA TCCGGACTGC GGGCTGAAGA CGCGCGAGTG GCGGCAGGTC
GACGCGGCGC TCGCGGCGAT GGTCGACGCG GCCAAGCGCG TGCGGCAGAA GGTCGAGGAG
GCGGTGCCGG CGTGA
|
|---|
| Protein sequence | MTTAHILGFP RIGAQRELKF ALERYWRDGA SADAERALVD TGRALRAEHW RIERDAGLDC
VTVGDFAWYD HVLTTLAHVG GLPRRFGFDA HALTLADYFA AARGNAAQPA MEMTKWFDTN
YHYLVPEYSP ATTFGPGVEW LFDEVREARA LGHRAKAALV GPLTLLWLGK ARDGLVERLA
LLPRLVPAYR ALLARLREAG VDWVQIDEPI FSLDLPDAWR DAARPTYEAL APGAPKLLVA
TYFDDASEHA ALLKALPVAG LHIDLVRADA QLDAFVADYP ADKVLSCGIV DGRNVWRNDL
DRSLARLAPV RDALGERLWV ATSCSLLHVP VDLAHEPRLD EELKTWLAFA AQKTREVAAL
RDALVKGRAA VAAEFDDAAA AAAARRTSAR IHNPLVKRRV AALTDADARR ASTYSVRAAA
QRARFGLPLL PTTTIGSFPQ TPEIRRARAA FKQGVLDHLG YLEAMREQVR IAIDKQLAYG
LDVLVHGEAE RNDMVEYFGE LLWGFAITSN GWVQSYGSRC VKPPLVYGDV YLPEPMTVGW
ASYAQSLSAK PVKGMLTGPV TMLQWSFVRD DQPRATTALQ IALALRQETL DLEKAGIGMI
QIDEPALREG LPLKARERAA YLDWAVRAFG IAASGVADDT QIHTHMCYSE FGDILPSIAA
LDADVISIET TRSNMELLDA FETFDYPNEI GPGVYDIHSP RVPDADEIER LILLALERIP
AQRLWVNPDC GLKTREWRQV DAALAAMVDA AKRVRQKVEE AVPA
|
|---|
| |