| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS668_2858 |
|---|
| Symbol | rimM |
|---|
| ID | 4882726 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia pseudomallei 668 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009074 |
|---|
| Strand | - |
|---|
| Start bp | 2815565 |
|---|
| End bp | 2816254 |
|---|
| Gene Length | 690 bp |
|---|
| Protein Length | 229 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 640128786 |
|---|
| Product | 16S rRNA-processing protein RimM |
|---|
| Protein accession | YP_001059877 |
|---|
| Protein GI | 126440606 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0806] RimM protein, required for 16S rRNA processing |
|---|
| TIGRFAM ID | [TIGR02273] 16S rRNA processing protein RimM |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 0.765459 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCGGGTC ACGATTCCGG TAATGCAAAG CGCGGGCGGT CGCCGTCGTT CGGCGTGTTC
GTCCGCAAGC CGGTCGAGCG CACGTCCGCG AAAGGGACGA GCGACGGCGC GGTTGATTCG
CAAGCAATTC GCATCGATGC GGCGCAGTCG TGGCCGGACG ATGCGGTTGA GGTCGGCGCG
GTGGTCGATG CGTACGGCCT GAAGGGCTGG GTCAAGCTCG CGGCCCACGC CGGTGCGGGG
CGAGGCGGCG ATGCGCTGCT CAAGGCCCGC GACTGGTGGC TGCAAAAGGG CGCGGAGCGG
AAGTTCGCGC GCGTCACGCA GGCGAAGCTG CACGGCGACA CGGTCGTCGC ACATCCGGAC
GGCTCGGTCG ATCGCGATAC GGCGCTCGCG CTGCGCGGCG CTCGCGTGTT CGTGCGCCGC
GGCGATTTCC CGGCGCTCGC CGCCGACGAA TTCTACTGGG TCGATCTGAT CGGCCTCGAT
GTCGTCAACG AGGCGGGTGT CGCGCTCGGC AAGATTGCCG ACATGATCGA CAACGGCGTG
CATTCGATCA TGCGCGTCGA ATATCCGGCG ACGGGCAAGG ATGGTCGGCC GAAAACCGGC
GAGCGGCTGA TTCCGTTCGT CGGCGTGTAC GTGAAGGCGG TCGAGCAGGC GGCGGGGCGC
GTCGTCGTCG ACTGGGAAGC CGATTACTGA
|
|---|
| Protein sequence | MAGHDSGNAK RGRSPSFGVF VRKPVERTSA KGTSDGAVDS QAIRIDAAQS WPDDAVEVGA
VVDAYGLKGW VKLAAHAGAG RGGDALLKAR DWWLQKGAER KFARVTQAKL HGDTVVAHPD
GSVDRDTALA LRGARVFVRR GDFPALAADE FYWVDLIGLD VVNEAGVALG KIADMIDNGV
HSIMRVEYPA TGKDGRPKTG ERLIPFVGVY VKAVEQAAGR VVVDWEADY
|
|---|
| |