Gene BURPS668_2546 details

Gene Information

• Locus tag: BURPS668_2546
• ID: 4884184
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Burkholderia pseudomallei 668
• Kingdom: Bacteria
• Replicon accession: NC_009074
• Strand: +
• Start bp: 2518203
• End bp: 2518925
• Gene Length: 723 bp
• Protein Length: 240 aa
• Translation table: 11
• GC content: 72%
• IMG OID: 640128474
• Product: TPR repeat-containing protein
• Protein accession: YP_001059572
• Protein GI: 126438621

Plasmid Coverage information

• Num covering plasmid clones: 34
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAACCTT CCCGCGGCCG CGCGCCGAGC GCTGCGACCC TTGTTGCGAC CGCCGCCGTG 
AGCGCCGCGC TCGCGCTCCT TCCGGGCGCG GCGGCCCTTG CGCAGAAAGC GCCCGCCCCC 
ACCGACGGCA CGCCGGAAAT CGACGCGTCG ATCACGAATC GCAACTGGGC GCAGGCGCTC 
GCGCAGCTCG ACGCGCGCAT CGCGTCGAAC CCGCGCGACG TGCAGGCGCA GTTCAAGCGC 
GGCACCGTGC TCGCGCGGCT GAACCGCGAC GACGACGCGA TCAGGCAGTT CGTCGAGCTG 
ACGCAGGCCT ATCCGGAACT GCCGGAACCC TACAACAACC TGGCGGCGCT CTACGCGAAG 
CACGGCCGCT ACGACGACGC GCGCAGCGCG CTCGTCACGG CGACGCACGC GAACCCGAAC 
TACGGGCTTG CGTACGAGAA CCTCGGCGAT CTCTACCTGC GCCTCGCGGC CGAATCGTAC 
AAGCGCGCGC AGTCGCTCGG CCGCACCACG GGCGCGAGCG CGCAACGCCT GTCGGATCTG 
CAGAAGATCA TCGCGCCGCC GAAGACGAGG GCGGCCGCCG CGCCGGCCCC GGCCGCGCGC 
GACTATTCGG CGCGGGCCGC CGCGAACGTG ACGACCACCA CGCTGCCGCT GTCCCCGACG 
TTCCAGTTCG GCGGCCCGAG CGGCATGCTC GCGATGCCGC CTTACGCCGC ACCGTCACAA 
TGA 

 

Protein sequence

MKPSRGRAPS AATLVATAAV SAALALLPGA AALAQKAPAP TDGTPEIDAS ITNRNWAQAL 
AQLDARIASN PRDVQAQFKR GTVLARLNRD DDAIRQFVEL TQAYPELPEP YNNLAALYAK 
HGRYDDARSA LVTATHANPN YGLAYENLGD LYLRLAAESY KRAQSLGRTT GASAQRLSDL 
QKIIAPPKTR AAAAPAPAAR DYSARAAANV TTTTLPLSPT FQFGGPSGML AMPPYAAPSQ