| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS668_2533 |
|---|
| Symbol | |
|---|
| ID | 4883577 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia pseudomallei 668 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009074 |
|---|
| Strand | - |
|---|
| Start bp | 2507052 |
|---|
| End bp | 2508884 |
|---|
| Gene Length | 1833 bp |
|---|
| Protein Length | 610 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 640128461 |
|---|
| Product | GDSL-like lipase/acylhydrolase domain/outer membrane autotransporter barrel domain-containing protein |
|---|
| Protein accession | YP_001059560 |
|---|
| Protein GI | 126439702 |
|---|
| COG category | [I] Lipid transport and metabolism
[R] General function prediction only |
|---|
| COG ID | [COG3240] Phospholipase/lecithinase/hemolysin |
|---|
| TIGRFAM ID | [TIGR01414] outer membrane autotransporter barrel domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.834421 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACGATCG GTTCGAAGAC GAAGCTTGCG CTCGGCATCG CGCTGGCGAT GCCCGCCGCG
GCCTGGGCGT ACACGTTCTA TGCGCTCGGC GACAGCCTGA CCGACAATGG CCGCGTCGTC
AGGCTCACCG GCATCCTGCC GAACGCGACG TCGACGATCT TTCGCGGCGG CCGCTCGTCG
AACGGCCCGG TCTGGGCCGA GTATCTGCCG GGCCTGATCG GCGCGCGATT CGCGCCCGAT
GACGATTACG CGATCAACGG TGCGCTGAGC GGGCACGGCG GCTATCTCAA CATCATTCCG
ACGCGCCCGA CATGGCGCAC GCTGCCCGGC TTCGTCGATC AGGTCGAGCA GTTGATCGCC
GCACATCCGC GCCTGCGGCG CGACGATCTG GTCGGCGTCT GGATCGGCAC CAACGATCAG
GACCTGACCA AGGCGAGCCT GAACGGCATC GAGCCGTTTC TCGGCGTGCC CCGGCCGGCC
AATATCGCGG AAATGAGCGC GTATACGCTA ACGAACCTCA ATGCGCAGTT GCAGCGTTTG
ATCGGCGCCG GCGCGCGTCA GTTCGTGATC CTGAACCTGA ACGACGCCGG CGGCACGCGG
CCCGGATACG TCGACTACAA CGGCAAGCTG CCCGAGGACC TCGCGCGGTT TTCGCGGCAG
GGCGTGAACG TCCATCTGTT CGACGTGTCG GCGCTGCTGA ACCAGATGCG CCGCAACCCG
TCGGCCTACG GGCTGAACGA CACGCCGGAC GTGCAGTGCC GCTACGTTCC CTCCTGCAGC
GGCGGCTCGG TCGAGCTGCA GAACACCTAT CTCACGGCGG ACGGCACGCA CATGATGACG
AGCGTGCACG AGTACATCGC GCGCTACCTC GCGAATCAGC TGAATGCGCC GGCCGCGATT
TCGACCGCGC CGGTGCTTGG GCTCGACGTG GCGCGGGCGG GCGCGCTGTC GGCGCTGAAC
GCGGCCGACG GCGGGCCGCT CGGGCCAGCG CGCGTCGCGT GGTCGGACAG GCTGTCGCTT
TTCGCGGACG TCGGCTACAC GCGCAACTTT CACGGCGCGG CGGGCGGCAT GAACGCATTC
GATAGCGACG TCGAGATGTT CTCGATCGGC GCCGACTACA AGCTGTCCGA AGCATCGAGA
GCCGGTGCGC TCTTGTCGAG CGGCAATGCG AACGGCTCGC TCGCCGGCGG GCAAGGGCGG
ATCGGGCTGC ATGCATACCG GCTCGGCGTT TATCACGCAT TCGAGCGCGC GGGCCTGTTC
GTGCGCGCGT ATGCCGGCGC GGGCTGGAGC CGATATCGGC TCGATCGCGC CGCCGTGCTG
CCGGGCGCCG TTCGCGCGAG CACCAGCGGC TTCGATTTCG GTGCGCTCGT CAAGGCCGGA
TATCTGTTCG CGCTCGGCGG CGTGCGGCTC GGCCCCGTCG CCGACGTCGG CTATACGCAG
CTTGTCGCGC GGGGCTACAC GGAAGACGGC GATCCGATTC TCGCGCAGAA CGTCGGCGTG
CAGCGGCTGA AGGGCGTGAG CGCGGGAGCG GGCGTGCGCT TCGCCGCGCC GCTCGCGGCG
ATCGGGCGGC GCGCCGGCGA GTTGTCCGCC GAGGCGCAAC TGCGGCACGA CGCATTCGGC
GACCGTACGC TCGTCACCGC CCAGCGTTAT GCGCCCGGTC TGCCGATCGG CACGGCCGTC
GACGGCGCGA GCGCAACCTA TGAGCGGCTG TCGGTCGCGC TCACCGTGAA TCCCGCGAAG
CGATGGCGGG GCAAGCTCGT CGTGCAGACG GACCTCGGTA CCGCGCAGCG CCGTTCGTAC
ACGCTGCTCG CCCTGCTGGG CGGCACGTTT TGA
|
|---|
| Protein sequence | MTIGSKTKLA LGIALAMPAA AWAYTFYALG DSLTDNGRVV RLTGILPNAT STIFRGGRSS
NGPVWAEYLP GLIGARFAPD DDYAINGALS GHGGYLNIIP TRPTWRTLPG FVDQVEQLIA
AHPRLRRDDL VGVWIGTNDQ DLTKASLNGI EPFLGVPRPA NIAEMSAYTL TNLNAQLQRL
IGAGARQFVI LNLNDAGGTR PGYVDYNGKL PEDLARFSRQ GVNVHLFDVS ALLNQMRRNP
SAYGLNDTPD VQCRYVPSCS GGSVELQNTY LTADGTHMMT SVHEYIARYL ANQLNAPAAI
STAPVLGLDV ARAGALSALN AADGGPLGPA RVAWSDRLSL FADVGYTRNF HGAAGGMNAF
DSDVEMFSIG ADYKLSEASR AGALLSSGNA NGSLAGGQGR IGLHAYRLGV YHAFERAGLF
VRAYAGAGWS RYRLDRAAVL PGAVRASTSG FDFGALVKAG YLFALGGVRL GPVADVGYTQ
LVARGYTEDG DPILAQNVGV QRLKGVSAGA GVRFAAPLAA IGRRAGELSA EAQLRHDAFG
DRTLVTAQRY APGLPIGTAV DGASATYERL SVALTVNPAK RWRGKLVVQT DLGTAQRRSY
TLLALLGGTF
|
|---|
| |