Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BURPS668_2442 |
Symbol | ligA |
ID | 4882579 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia pseudomallei 668 |
Kingdom | Bacteria |
Replicon accession | NC_009074 |
Strand | - |
Start bp | 2407685 |
End bp | 2409760 |
Gene Length | 2076 bp |
Protein Length | 691 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 640128370 |
Product | DNA ligase, NAD-dependent |
Protein accession | YP_001059474 |
Protein GI | 126441747 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0272] NAD-dependent DNA ligase (contains BRCT domain type II) |
TIGRFAM ID | [TIGR00575] DNA ligase, NAD-dependent |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.414068 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCCCGAT CCCCAGTTGA ACCGCCCGCC AGCCAGCCGG CGAAGCGCGC CGCGTGGCTG CGCGCCGAGC TCGAGCGGGC GAACTACGCG TATTACGTGC TCGACCAGCC GGACCTGCCC GACGCCGAGT ACGATCGCCT CTTCGTCGAA CTCCAACGGA TCGAGGCCGA GCACCCCGAT CTCGTCACGC CCGATTCGCC GACGCAGCGC GTCGGCGGCG AGGCCGCGAG CGGCTTCACG CCGGTCGTCC ACGACAAGCC GATGCTCTCG CTCAACAACG GCTTTGCCGA CGAGGACGTC ATCGCGTTCG ACAAGCGCGT CGCCGACGGC CTCGACAAGG CGACCGACCT CGCCGGCACC GTGACCGAGC CCGTCGAATA CGCGTGCGAG CTGAAGTTCG ACGGCCTTGC GATCTCGCTG CGCTACGAGA ACGGCCGCTT CGTGCAGGCG TCGACGCGCG GCGACGGCAC GACGGGCGAA GACGTCACCG AGAATATCCG CACGATCCGT GCGATTCCGC TGACGCTCAA GGGCAAGCGG CTACCGCGCA TGCTCGACGT GCGCGGCGAG GTGCTGATGT TCAAGCGCGA TTTCGCGCGG CTGAACGAGC GCCAGCGCGC GGCGGGCCAG CGCGAGTTCG CCAATCCGCG CAACGCGGCG GCGGGCAGCC TGCGGCAGCT CGATTCGAAG ATCACCGCGT CGCGGCCGCT TTCGTTTTTC GCATACGGAA TCGGCGTGCT CGACGGCGCC GACATGCCCG ACACGCACAG CGGCCTGCTC GACTGGTACG AGACGCTCGG GTTGCCCGTG AACCGGGAGC GCGCGGTCGT GCGCGGCGCG GCGGGCCTGC TCGCGTTCTT CCATTCGGTG GGCGAGCGGC GCGAATCGTT GCCGTACGAC ATCGACGGCG TCGTCTACAA GGTGAACCGC CGCGACGAGC AGGATCGGCT CGGCTTCGTG TCGCGCGCGC CGCGCTTCGC GCTCGCGCAC AAGTTCCCCG CGCAGGAGGC GCTCACGAAG CTCATCGCGA TCGACGTGCA GGTCGGCCGC ACCGGCGCGA TCACGCCGGT CGCGCGCCTC GAGCCCGTGT TCGTCGGCGG CGCGACCGTC ACGAACGCGA CGCTGCACAA CGAGGACGAG GTGCGCCGCA AGGACATCCG CATCGGCGAC ACGGTCATCG TGCGCCGCGC GGGCGACGTG ATTCCCGAAG TGGTGTCGGC CGTGCTCGAC CGGCGTCCCG CCGACGCGCA GGAGTTCGTG ATGCCGACCG AATGCCCGGA ATGCGGATCG CGGATCGAGC GATTGCCCGA CGAGGCGATC GCGCGCTGCA CGGGCGGGCT GTTTTGCCCC GCGCAGCGCA AGCAGGCGCT CTGGCACTTC GCGCAGCGCC GTGCGCTCGA CATCGATGGG CTCGGCGAGA AGATCATCGA TCAACTCGTC GAGCAGAACC TCGTGCGCAC GCCGGCCGAT CTGTTCAATC TCGGCTTCTC GACGCTCGTC GCGCTCGATC GCTTCGCGGA GAAATCCGCG CGGAACCTGA TCGATTCGCT CGAAAAGGCG AAGCACACGA CGCTCGCGCG CTTCATTTAC GCGCTCGGCA TCCGGCACGT CGGCGAATCG ACGGCGAAGG ACCTCGCGAA GCACTTCGGC TCGCTCGATC CGATCATGGA CGCGCCGATC GACGCATTGC TCGAGGTCAA CGACGTCGGG CCGATCGTCG CCGAATCGAT CCATCAATTC TTCGCCGAGG AGCACAATCG CACGGTGATC GAACAGTTGC GCGCGCGGGG CAAGGTCACA TGGCCCGAAG GGCCGCCCGC GCCGCGCGCG CCGCAAGGCG TGCTCGCGGG CAAGACCGTC GTGCTCACGG GCACGCTGCC GACGCTCACG CGGGAAGCCG CGAAGGAGAT GCTCGAGGCG GCGGGCGCGA AAGTCGCCGG CTCGGTATCG AAGAAGACCG ATTACGTCGT CGCGGGCGCC GACGCGGGCA GCAAGCTCGC GAAAGCCGAG GAACTCGGCA TTCCGGTGCT GGACGAAGCA GGCATGCACA CACTTCTGGA GGGCCACGCG CGATGA
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Protein sequence | MARSPVEPPA SQPAKRAAWL RAELERANYA YYVLDQPDLP DAEYDRLFVE LQRIEAEHPD LVTPDSPTQR VGGEAASGFT PVVHDKPMLS LNNGFADEDV IAFDKRVADG LDKATDLAGT VTEPVEYACE LKFDGLAISL RYENGRFVQA STRGDGTTGE DVTENIRTIR AIPLTLKGKR LPRMLDVRGE VLMFKRDFAR LNERQRAAGQ REFANPRNAA AGSLRQLDSK ITASRPLSFF AYGIGVLDGA DMPDTHSGLL DWYETLGLPV NRERAVVRGA AGLLAFFHSV GERRESLPYD IDGVVYKVNR RDEQDRLGFV SRAPRFALAH KFPAQEALTK LIAIDVQVGR TGAITPVARL EPVFVGGATV TNATLHNEDE VRRKDIRIGD TVIVRRAGDV IPEVVSAVLD RRPADAQEFV MPTECPECGS RIERLPDEAI ARCTGGLFCP AQRKQALWHF AQRRALDIDG LGEKIIDQLV EQNLVRTPAD LFNLGFSTLV ALDRFAEKSA RNLIDSLEKA KHTTLARFIY ALGIRHVGES TAKDLAKHFG SLDPIMDAPI DALLEVNDVG PIVAESIHQF FAEEHNRTVI EQLRARGKVT WPEGPPAPRA PQGVLAGKTV VLTGTLPTLT REAAKEMLEA AGAKVAGSVS KKTDYVVAGA DAGSKLAKAE ELGIPVLDEA GMHTLLEGHA R
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