| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS668_2440 |
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| Symbol | |
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| ID | 4883561 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia pseudomallei 668 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009074 |
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| Strand | + |
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| Start bp | 2405236 |
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| End bp | 2406960 |
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| Gene Length | 1725 bp |
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| Protein Length | 574 aa |
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| Translation table | 11 |
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| GC content | 75% |
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| IMG OID | 640128368 |
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| Product | RNA pseudouridine synthase family protein |
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| Protein accession | YP_001059472 |
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| Protein GI | 126439492 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1187] 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases |
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| TIGRFAM ID | [TIGR00093] pseudouridine synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGCACAA AATTGACCGT CAAGAATCCG CGCCCGGCGA CGCCCGGCCG CGCCCCCGTC
CGCTCCGGCA GCCTCACCGC GCGCAAGGTC GCGCGGCCCG ACCCGAAAGC GGCGGGCGCG
AAACCCGCCG CGGCGAAGCC TGCTGCGAAG TCCGCATCGG CTGCCAAGCC GGCGGCGCCG
CGCGGCGCGG CGAACGCTGC GCCGAAGCGC GCGCCGGGGC CGTCGCGCCC GGCCGCGGCG
TCCGAAGGCA AGCGCGTCGC GAAGCCGCGC ACCGCGCACG ACGCCGGCCG CACGGGCGGC
GAGCGTGCGC CGGCCAAGCG CGCCACCGCG CCCGGTGCGC CCGGCGCGGC GTCCGCGCCG
CGCACGCGCC GCACCGACGC GAAGCCGGCG CGGCGCACCG ACGAACGCCC TGCCGGCCGC
GCCGGCAATC GCCCTGCCGG CCGCGACGAG CGCGCACCGC GCGACTCGGA TGCGCGCGCG
TTCGATGCGG GCACGCGCGG TAAGGACCGC GCGCCCCGCG AGGGCGCAAG GCCCGGCGCA
CGGGGCGCGA CGGGCGCGAA GTTCGGCGGC GCGGCGCGCC GATCGGACGA CGCCGACCGT
CGAACGCCCC GCGCGACGCG TGCGGACAGC CGCGCGCGCG ATGCCGCGCC GTCGTCGTTC
GCGGGCAAGA CCGCGACAGC CGGCAAGCGT GCGCCGCAGC GCGCCGACGA TCGCTACGGC
GCAGCCGGGA AGCGCACATC GCCGCGCCCC GAGCGAACCG AGCGTACCGC CCGCCTCGGC
GAACGGCCGG CCACCCGCGC GAGCACATCC GGCGAGCGCC GCCCCACGGC CCGCGCGGCG
ACGGGTTCGC GCCTCAAGCT CGCGCAGCCG ATCAAGCGCG GCAGCGGCGA ACTGGGCGAA
TCCGCTCGCG GCGGTGAGCA CGGTGAGCAC GGCGAACGCG GCAAGCGTAT CGAGCGCGGC
GACGAAACCG GCCTCGTGCG CCTGTCGAAG CGCATGTCGG AGCTGGGTCT CTGCTCGCGC
CGCGAAGCAG ACGAATGGAT CGAGAAAGGC TGGGTGCTCG TCGACGGCGA GCGCATCGAC
ACGCTCGGCA CGAAGGTGCG CGCCGACCAG CGCATCGAGA TCGATTCGAA CGCGCGCGCC
GCGCAGGCCG CGCAAGTGAC GATCCTGCTG CACAAGCCGG TGGGCTACGT GTCGGGCCAG
GCGGAGGACG GCTACGCCCC CGCCGCGACG CTCGTCACGC GCGAGAACCA CTGGAGCGGC
GACCGCTCGC CGCTGCGCTT CTCGCCGCAG CACCTGCGCG CGCTCGCGCC CGCGGGCCGG
CTCGACATCG ATTCGACGGG CCTTCTCGTG CTGACGCAGA ACGGGCGCGT CGCGAAACAG
CTGATCGGCG AACAATCGGA CATCGACAAG GAATACCTGG TGCGCGTGCG CTTCGGCGAG
CGCACGGCCG ACATCGAACG CCACTTCCCC GCCGAGTCGC TCGCGAAGCT GCGCCACGGC
CTCGAGCTCG ACGGCGTGCC GCTCAAGCCC GCGATGGTCA GTTGGCAGAA CGGCGAGCAA
CTGCGCTTCG TGCTGCGCGA AGGCAAGAAG CGCCAGATTC GCCGGATGTG CGAACTCGTC
GGCCTCGAGG TGATCGGCCT GAAGCGCGTG CGGATGGGCC GCGTGATGCT GGGCGCGCTG
CCGCAAGGCG AGTGGCGCTA TCTCGGGCCG GACGAATCGT TCTGA
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| Protein sequence | MRTKLTVKNP RPATPGRAPV RSGSLTARKV ARPDPKAAGA KPAAAKPAAK SASAAKPAAP
RGAANAAPKR APGPSRPAAA SEGKRVAKPR TAHDAGRTGG ERAPAKRATA PGAPGAASAP
RTRRTDAKPA RRTDERPAGR AGNRPAGRDE RAPRDSDARA FDAGTRGKDR APREGARPGA
RGATGAKFGG AARRSDDADR RTPRATRADS RARDAAPSSF AGKTATAGKR APQRADDRYG
AAGKRTSPRP ERTERTARLG ERPATRASTS GERRPTARAA TGSRLKLAQP IKRGSGELGE
SARGGEHGEH GERGKRIERG DETGLVRLSK RMSELGLCSR READEWIEKG WVLVDGERID
TLGTKVRADQ RIEIDSNARA AQAAQVTILL HKPVGYVSGQ AEDGYAPAAT LVTRENHWSG
DRSPLRFSPQ HLRALAPAGR LDIDSTGLLV LTQNGRVAKQ LIGEQSDIDK EYLVRVRFGE
RTADIERHFP AESLAKLRHG LELDGVPLKP AMVSWQNGEQ LRFVLREGKK RQIRRMCELV
GLEVIGLKRV RMGRVMLGAL PQGEWRYLGP DESF
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