Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BURPS668_2431 |
Symbol | dxr |
ID | 4881765 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia pseudomallei 668 |
Kingdom | Bacteria |
Replicon accession | NC_009074 |
Strand | - |
Start bp | 2394980 |
End bp | 2396176 |
Gene Length | 1197 bp |
Protein Length | 398 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 640128359 |
Product | 1-deoxy-D-xylulose 5-phosphate reductoisomerase |
Protein accession | YP_001059463 |
Protein GI | 126441123 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG0743] 1-deoxy-D-xylulose 5-phosphate reductoisomerase |
TIGRFAM ID | [TIGR00243] 1-deoxy-D-xylulose 5-phosphate reductoisomerase |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.257219 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAAAAAC GTCTGACATT GCTCGGTTCG ACGGGCTCGA TCGGAGACAG CACGCTCGAC GTCGTCGCGC GTCATCCGGA ACGCTTCGCG GTTCATGCGC TCACGGCCCA CCGCAACGGC GAGAAGCTCG TCGCCCAGTG CCTGCGCTTT GCGCCGGACG TCGCGGTGGT CGGCGACGCC GAAACCGCCG CGCGGGTCGA GGCGCAATTG CGCGCCGCGG GCAGCCGGAC CCAGGTCGCG TACGGCAAGC AGGCGCTCGT CGACGTATCG AAGAGCGACG GCTGCGACAC CGTCGTCGCG GCGATCGTCG GCGCGGCGGG GCTCGCGCCG AGCCTCGCCG CCGCGCGCGC GGGCAAGCGC ATCCTGCTCG CGAACAAGGA AGCGCTCGTG ATGTCGGGCG CGATCTTCAT GGACGCGGTG CGCGATCACG GCGCGATCCT GTTGCCCGTC GACAGCGAGC ACAACGCGAT CTTCCAGTGC ATGCCGCGCG ACGCGGCCGA GCATGGGGGC ATCGCGAAGA TCATCGTGAC CGCGTCGGGC GGCCCGTTCC GCACGCGCGA GCCCGCGACG CTCGCGAGCG TGACGCCCGA CGAGGCGTGC AAGCATCCGA ACTGGGTGAT GGGCCGCAAG ATCTCCGTCG ATTCCGCGAC GATGATGAAC AAGGGCCTCG AGGTGATCGA GGCGCACTGG CTGTTCGGCC TGCCGAGCGA GCGCATCGAC GTGCTGATCC ATCCGCAGAG CGTGATCCAT TCGCTCGTGT CGTATCGCGA CGGCTCGGTG CTCGCGCAGC TCGGCAACCC GGACATGCGC ACGCCGATCG CGCACGCGCT CGCGTTTCCC GAGCGTGTCG ACGCGGGCGT CGCGCAGCTC GATCTCGCGC AGATCGCGAC GCTCACGTTC GAGAAGCCCG ACTACGCGCG CTTCCCGTGC CTCGCGCTCG CCATCGACGC GCTCGAGGCG GGCGGCGTCG CGAGCGCGGC GCTCAATGCG GCGAACGAAA TCGCCGTGGA CGCGTTCCTG TCGCGCCGCA TCCGTTTCAC CGCGATCGCG CAGACGGTCG GCGCGGTGCT CGATGGGCTG TCCAACCGCA CGCCGGGCGG CCTCGACGAC GTGATCGAGG CCGACGCCGC CGCGCGCCGC GCGGCGACGG CGTTCATCGG CAAGCTGCCC GCGCCCGGCG TCGAGCGCGC CGCCTGA
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Protein sequence | MQKRLTLLGS TGSIGDSTLD VVARHPERFA VHALTAHRNG EKLVAQCLRF APDVAVVGDA ETAARVEAQL RAAGSRTQVA YGKQALVDVS KSDGCDTVVA AIVGAAGLAP SLAAARAGKR ILLANKEALV MSGAIFMDAV RDHGAILLPV DSEHNAIFQC MPRDAAEHGG IAKIIVTASG GPFRTREPAT LASVTPDEAC KHPNWVMGRK ISVDSATMMN KGLEVIEAHW LFGLPSERID VLIHPQSVIH SLVSYRDGSV LAQLGNPDMR TPIAHALAFP ERVDAGVAQL DLAQIATLTF EKPDYARFPC LALAIDALEA GGVASAALNA ANEIAVDAFL SRRIRFTAIA QTVGAVLDGL SNRTPGGLDD VIEADAAARR AATAFIGKLP APGVERAA
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