Gene BURPS668_2426 details

Gene Information

• Locus tag: BURPS668_2426
• Symbol: lpxD
• ID: 4885415
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Burkholderia pseudomallei 668
• Kingdom: Bacteria
• Replicon accession: NC_009074
• Strand: -
• Start bp: 2389524
• End bp: 2390609
• Gene Length: 1086 bp
• Protein Length: 361 aa
• Translation table: 11
• GC content: 71%
• IMG OID: 640128354
• Product: UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase
• Protein accession: YP_001059458
• Protein GI: 126441372
• COG category: [M] Cell wall/membrane/envelope biogenesis
• COG ID: [COG1044] UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase
• TIGRFAM ID: [TIGR01853] UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase

Plasmid Coverage information

• Num covering plasmid clones: 14
• Plasmid unclonability p-value: 0.0118162
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCATTGA CGCTTGAGGC GCTCGCCGCG CGGTTCGGCG GCGAGATCGT CGGCGACGGC 
CGCTGCGAGG TGGGCGCTCT CGCGCCGCTC GATCAGGCGG GCCCGCGGCA GCTCGCGTTC 
CTCGCCAATC CGAAGTATCT GGCGCAGGTC GAGACGACGG GCGCCGGCGC GGTGCTGATC 
GCGCCGGGCG ATCTCGAGAA GCTCGGCGCG GCCGCGCACG GCCGCAATTT CATCGTCACG 
CCGAATCCCT ACGCCTATTT CGCGCGGGTC GCGCAGATGT TCATCGATCT CGCCGCGCCG 
CCGCGCGCGG CCGGCGTGCA TCCGAGCGCG ACGATCGATC CGGCCGCGCA GGTCGCCGCG 
AGCGCGGTGA TCGGCCCGCA CGTGACGGTC GAGGCGGGCG CCGTGATCGG CGAGCGCGCG 
CAGCTCGACG CGAACGTGTT CGTCGGCCGC GGCACGCGGA TCGGCGACGA TTCGCACCTG 
TACCCGAACG TCGCGATCTA TCACGGCTGC ACGCTCGGGC CGCGCGCGAT CGTGCACTCG 
GGCGCCGTGA TCGGCTCCGA CGGCTTCGGC TTCGCACCGG ATTTCGTCGG CGAAGGCGAC 
GCGCGCACCG GCGCGTGGGT CAAGATTCCG CAGGTCGGCG GCGTGAAGGT CGGCCCCGAC 
GTCGAGATCG GCGCGAACAC GACGATCGAC CGCGGCGCGA TGGCGGACAC CGTCATCGAC 
GAATGCGTGA AGATCGACAA TCTCGTGCAG ATCGGCCACA ACTGCCGGAT CGGCGCCTAC 
ACGGTGATCG CCGGCTGCGC GGGCATCGCG GGCAGCACGA CGATCGGCAA GCACTGCATG 
ATCGGCGGCG CGGTCGGCAT CGCCGGGCAC GTGACGCTCG GCGATTACGT GATCGTCACC 
GCGAAGTCGG GCGTGTCGAA ATCGCTGCCG AAGGCGGGCA TCTATACGAG CGCGTTTCCG 
GCCGTCGAGC ACGGCGACTG GAACCGGAGC GCGGCGCTCG TGCGCAACCT GGACAAGCTG 
CGCGATCGGA TCAAGGCGCT CGAAACCGCG CTGGCCGCGC GGGAAGGCGA CGCCGGCGGC 
GCATGA 

 

Protein sequence

MALTLEALAA RFGGEIVGDG RCEVGALAPL DQAGPRQLAF LANPKYLAQV ETTGAGAVLI 
APGDLEKLGA AAHGRNFIVT PNPYAYFARV AQMFIDLAAP PRAAGVHPSA TIDPAAQVAA 
SAVIGPHVTV EAGAVIGERA QLDANVFVGR GTRIGDDSHL YPNVAIYHGC TLGPRAIVHS 
GAVIGSDGFG FAPDFVGEGD ARTGAWVKIP QVGGVKVGPD VEIGANTTID RGAMADTVID 
ECVKIDNLVQ IGHNCRIGAY TVIAGCAGIA GSTTIGKHCM IGGAVGIAGH VTLGDYVIVT 
AKSGVSKSLP KAGIYTSAFP AVEHGDWNRS AALVRNLDKL RDRIKALETA LAAREGDAGG 
A