Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BURPS668_2371 |
Symbol | |
ID | 4884920 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia pseudomallei 668 |
Kingdom | Bacteria |
Replicon accession | NC_009074 |
Strand | + |
Start bp | 2343150 |
End bp | 2343830 |
Gene Length | 681 bp |
Protein Length | 226 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 640128299 |
Product | PspA/IM30 family protein |
Protein accession | YP_001059403 |
Protein GI | 126438743 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG1842] Phage shock protein A (IM30), suppresses sigma54-dependent transcription |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.369342 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCGCTTT TCGACTCTAT TTCGCGCACG ATCAAAGGTC TGCTGAACGA CGCGGCGGAC TCGGTGCAGG ACCCGTCGCG CGACGCGCGG CAGATCGTGC GGGAGCTCGA CGACAGTATC GGCCGCGCGG AAAACTCGCT GATCGAGATC GAAGCGCAGG TCGCAACGCA ACGCAGCAAG CGCGACACCG CCGACGAGCG CGTGAAAAAG TACGAGGACG GCGCGAAGCG CGCGCTGCAA TCCGGCGACG AGGCGCTCGC GCGCGAGGCG CTCGCCGCGC AGGCGAACGC CGAGGCCGAG CGCGACGCGC TCGCGCGCGA ACTCGATACG CTCGAGCCGT CGGTCGACAA GCTCAAAGGC CAGATCGCCG ACATGCGCGC GCGCCGCAAC GATCTGAACG CGCGCTCGAA CATCCTGCAG GCAAAGCAGG AAATCGCGCA GGCGAAGGAC GTCGCGGCCA CCGCACTCGG CGGAATCGGC GGCAAGAACC TGTCCGAGGA CTTCCAGAAG CTCGAGGACA AGGTCGCGCT GTCGAACGCG CGTTCGGACG CGCGCCTGAA TTCAGCCGAT ACGAACAGCG GCCGCGCGCT CGACGACAAG CTCGCGGCGC TGAACAAGGG GCCGTCCGTC GAGGACCGCC TCGAAGCGCT GAAAAAGCAA CTGAACACGC CGGCGCAGTA A
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Protein sequence | MSLFDSISRT IKGLLNDAAD SVQDPSRDAR QIVRELDDSI GRAENSLIEI EAQVATQRSK RDTADERVKK YEDGAKRALQ SGDEALAREA LAAQANAEAE RDALARELDT LEPSVDKLKG QIADMRARRN DLNARSNILQ AKQEIAQAKD VAATALGGIG GKNLSEDFQK LEDKVALSNA RSDARLNSAD TNSGRALDDK LAALNKGPSV EDRLEALKKQ LNTPAQ
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