| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS668_2296 |
|---|
| Symbol | |
|---|
| ID | 4884916 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia pseudomallei 668 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009074 |
|---|
| Strand | - |
|---|
| Start bp | 2276000 |
|---|
| End bp | 2277640 |
|---|
| Gene Length | 1641 bp |
|---|
| Protein Length | 546 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 640128224 |
|---|
| Product | long-chain-fatty-acid--CoA ligase |
|---|
| Protein accession | YP_001059331 |
|---|
| Protein GI | 126441386 |
|---|
| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGGTAAGC CGTTGCTGGG CCAGATGATG GATATGCCGC TGCTCGTGTC GTCGCTGATC
GCGCATGCGG CGCGGCACGC GGGTGACGTC GAGATCGTGT CCCGGCGCGT CGAGGGCGAC
ATTCACCGCT ATACCTATCG CGATTGCGAA GCGCGTTCCA AACGGCTCGC GCAGGCGCTG
ACCGGCCTGG GCGTGGGCGT GGGCGAGCGC ATTGGAACGC TCGCGTGGAA CGGCTACCGG
CACGTCGAGG CGTATTACGG CATCAGCGGG ATGGGCGCCG TCTGCCATAC GATCAACCCG
CGCCTCTTTC CCGAGCAGAT CGCGTACATC GTCAACCACG CCGAGGATCG ATACGTGCTG
TTCGACCTCA CCTTCGCGCC GCTCGTCGAT CAGCTCGCGC CGCAATGCCC GAACGTGAAG
GGCTGGATCG CGATGACGGA CGACGCGCAT CTGCCGAAGG GCGCGACGCC TTATCTCTGT
TACGAGACAC TCGTCGGCGC GCAGGACGGC GATTACGCCT GGCCGCTGCT CGACGAGCGG
CAGGCGTCGT CGCTCTGCTA CACGTCCGGC ACGACGGGCC ACCCGAAGGG CGCGCTCTAT
TCGCACCGCT CGACGGTGCT GCACGCGTAC GGCGCGGCGC TGCCCGACGC GATGGGGCTG
TCCTCGCGCG ACGCGGCGCT GCCCGTCGTG CCGATGTTCC ACGTCAACGC ATGGGGGCTG
CCGTACACGG CGGCGCTCAC CGGCACGAAG CTCGTGCTGC CCGGCAAGGA CCTCGACGGC
AAATCGCTGT ACGAGCTGAT CGAAAGCGAG CGCGTGACGT TCTCGGCGGG CGTGCCCACC
GTCTGGCTCG GTCTGCTCGG GTACATGCGC GAGGCCGGCG TGCGCTTCTC GACGCTCGAG
CGCACGGTGA TCGGCGGCTC CGCGTGCCCG CCTTCGATGC TCGAGACGTT CGAGGACGTC
TACGACGTGC GTGTGATCCA TGCATGGGGG ATGACCGAGC TGTCGCCGCT CGGCACGCTG
GCCAAGCTCA ATTGGGCGCA GTCGCAGCGC GGCATCGGCG AGCAGCGGCG GCTCCTCGAG
AAGCAGGGCC GGGTGATCTA CGGGATCGAT ATGCGCATCG TCGGCGAGGA CGGCCGCGAG
TTGCCGTGGG ACGGCGTCGC GTTCGGCGAC TTGCAGGTGC GCGGGCCGTG GGTGATCGAC
CGCTATTTCG GAATCGACGC GTCGCCGCTC GTCGACGGCT GGTTCCCGAC GGGCGACGTC
GCGACGATCG ACGCCGACGG CTTCCTGCAG ATCACCGATC GCAGCAAGGA CGTGATCAAG
TCGGGCGGCG AATGGATCAG CTCGATCGAC GTCGAGAACG TCGCGGTGGC GCACCCGGCC
GTCGCGGAGG CCGCGTGCAT CGCATGCGCG CATCCGAAAT GGACCGAGCG GCCGCTCCTC
GTCGTCGTCA AGCGCGCCGG CATGGACGTG ACGCGCGACG AACTGCTCGC GTTCTACGAG
GGCAAGGTCG CGAAATGGTG GATTCCGGAC GATGTCGCGT TCGTCGACGC GCTGCCGCAC
ACCGCGACGG GCAAGCTGCA AAAGCTCAAG CTGCGCGAGC AATTCCGGGG CCACGTGCTG
CCGACGGCCG TGGACGCGTA G
|
|---|
| Protein sequence | MGKPLLGQMM DMPLLVSSLI AHAARHAGDV EIVSRRVEGD IHRYTYRDCE ARSKRLAQAL
TGLGVGVGER IGTLAWNGYR HVEAYYGISG MGAVCHTINP RLFPEQIAYI VNHAEDRYVL
FDLTFAPLVD QLAPQCPNVK GWIAMTDDAH LPKGATPYLC YETLVGAQDG DYAWPLLDER
QASSLCYTSG TTGHPKGALY SHRSTVLHAY GAALPDAMGL SSRDAALPVV PMFHVNAWGL
PYTAALTGTK LVLPGKDLDG KSLYELIESE RVTFSAGVPT VWLGLLGYMR EAGVRFSTLE
RTVIGGSACP PSMLETFEDV YDVRVIHAWG MTELSPLGTL AKLNWAQSQR GIGEQRRLLE
KQGRVIYGID MRIVGEDGRE LPWDGVAFGD LQVRGPWVID RYFGIDASPL VDGWFPTGDV
ATIDADGFLQ ITDRSKDVIK SGGEWISSID VENVAVAHPA VAEAACIACA HPKWTERPLL
VVVKRAGMDV TRDELLAFYE GKVAKWWIPD DVAFVDALPH TATGKLQKLK LREQFRGHVL
PTAVDA
|
|---|
| |