| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS668_2283 |
|---|
| Symbol | |
|---|
| ID | 4884773 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia pseudomallei 668 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009074 |
|---|
| Strand | + |
|---|
| Start bp | 2264388 |
|---|
| End bp | 2265434 |
|---|
| Gene Length | 1047 bp |
|---|
| Protein Length | 348 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 640128211 |
|---|
| Product | glycine cleavage T-protein (aminomethyl transferase) family protein |
|---|
| Protein accession | YP_001059318 |
|---|
| Protein GI | 126441510 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0354] Predicted aminomethyltransferase related to GcvT |
|---|
| TIGRFAM ID | [TIGR03317] folate-binding protein YgfZ |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 0.695664 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCACAC CGATCGCCTC CCCGGCCGCG CAGGCCATCG CTCCCACCGC GCCGCCGACG
CTGCCCCGTC CGAGCGCCGA CGATTTCGCC GCCGTGCTCG AGCGCGGCGC GTTCGCGGCG
CTCGAGCAAT TCGGCATCGT CGACGTGACG GGCGCCGACG CCGCGACGTT TCTGCACGGC
CAGTTGACGA ACGACGTCGA ACATCTCGAC GCCGCGAGCG CGCGCCTGGC CGGCTACTGC
TCGCCGAAGG GGCGCCTGCT CGCGTCGTTC CTCGCATGGC GCGCCGGCCA CGACGTGCGC
CTGCTCGTAT CGAAGGACGT GCAGCCCGCG GTGCAAAAGC GCCTGTCGAT GTTCGTGCTG
CGCGCGAAGG CGAAGCTCGC CGACGCGAGC GGCGCGCTCG TCGCGATCGG CTTCGCGGGC
GACGTGCGCG CCGCGCTGTC GGGCATCTTC GACGCACTGC CCGACGGCAT CCACACGAAA
GTCGACGCGC CCGCCGGCGC GCTCATGCGG CTGCCCGACG CGGCGGGCCG CGCGCGCTAC
CTGTGGATCG CGACGCGCGC CGAGTTCGAC GCGCGCCTGC CCGCGCTCGA AGCCGCGCTG
CCGCGCGTGT CGGCCGCCGT CTGGGATTGG CTCGACGTGC GCGCGGGCGA GCCGCGCATC
ACGCAGCCGG CCGTCGAGCA ATTCGTTCCG CAGATGGTCA ACTTCGACGT GATCGGCGGC
GTCAACTTCC GCAAGGGCTG CTATCCGGGC CAGGAAGTCG TCGCGCGCAG CCAGTACCGG
GGCACGATCA AGCGCCGCAC CGCGCTCGCG CACGTCGCGG CCGGCACCGA CGCCGCGCAT
GCGGGCGTCG AGCTCTATCA TTCGGACGAT CCGGGCCAGC CGTGCGGGAT GATCGTGAAC
GCGGCGGCGG CGCCCGAAGG CGGCGTCGAC GCGCTCGTCG AGATCAAGCT CGCCGCGCTC
GGGAACGGAT CGGTCCACCT GGCGTCCGCG AGCGGCCCGA CGCTCGCGTT CCTGCCGCTT
CCCTACGCGC TGCCCGTCGA AGCCTGA
|
|---|
| Protein sequence | MSTPIASPAA QAIAPTAPPT LPRPSADDFA AVLERGAFAA LEQFGIVDVT GADAATFLHG
QLTNDVEHLD AASARLAGYC SPKGRLLASF LAWRAGHDVR LLVSKDVQPA VQKRLSMFVL
RAKAKLADAS GALVAIGFAG DVRAALSGIF DALPDGIHTK VDAPAGALMR LPDAAGRARY
LWIATRAEFD ARLPALEAAL PRVSAAVWDW LDVRAGEPRI TQPAVEQFVP QMVNFDVIGG
VNFRKGCYPG QEVVARSQYR GTIKRRTALA HVAAGTDAAH AGVELYHSDD PGQPCGMIVN
AAAAPEGGVD ALVEIKLAAL GNGSVHLASA SGPTLAFLPL PYALPVEA
|
|---|
| |