Gene BURPS668_2221 details

Gene Information

• Locus tag: BURPS668_2221
• ID: 4881920
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Burkholderia pseudomallei 668
• Kingdom: Bacteria
• Replicon accession: NC_009074
• Strand: +
• Start bp: 2211287
• End bp: 2211982
• Gene Length: 696 bp
• Protein Length: 231 aa
• Translation table: 11
• GC content: 71%
• IMG OID: 640128149
• Product: putative comE protein
• Protein accession: YP_001059256
• Protein GI: 126439923
• COG category: [L] Replication, recombination and repair
• COG ID: [COG1555] DNA uptake protein and related DNA-binding proteins

Plasmid Coverage information

• Num covering plasmid clones: 29
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCTTGAAC GCGACGCCCG GCTCGCGCCG CGCGCCGGCT TCGTTCCGAC AGCCACTCAC 
CCGTTCCATC AAAAGGGAGC TCCCGCCATG CTGAAAAAGC TGCTGATGCT GGTCGTCGCA 
CTGTCGCTTT CGCTGACCGC CGCGCTCGCC GCCGCGGTCG AAGTCAACAC CGCCGACCAG 
GCGGCGCTCG AATCGGTGAA GGGCCTCGGC CCGGTGAAAT CGAAGGCGAT CATCGACGAG 
CGCGCGAAGA ACGGCCCGTT CAAGGATGCC GACGATCTCG CGAACCGCGT GAAGGGTCTC 
GGCGCGAAAT CGGTCGCCCA TCTCGAGGCA GCGGGCCTGA CGATCGGCGG CTCGACCACG 
CCGCCGACGG GCGCGAAGGC GAAGACCGGC ACCGCGAAAC CGGCCGCGAC CGCGACGCCG 
GCGCCCGCTC CGGCACCGGC CCCGACTACC TCGAGCGCAA CGCCCGCGCC GTCCGCGGCG 
ACGCCCGCTC CCGCCACAGC CACGCCGTCG ACTGCGGCGA GCGCCCCGGC CGCGAAAAAG 
TCCCGTTCGT CGAAGAAGCA GGACAAGGCC GCCGCCGCGA GCGCCGCGGC GCAGGCGAGC 
GCGCCGGCCG CCGCGTCGAC GACGAAGGCG AAAGGCTCGA AGAAGAGCAA GAAGAACAAG 
GCGGCGACGC CGGCGTCCGC GGCATCGGGC GCATAA 

 

Protein sequence

MLERDARLAP RAGFVPTATH PFHQKGAPAM LKKLLMLVVA LSLSLTAALA AAVEVNTADQ 
AALESVKGLG PVKSKAIIDE RAKNGPFKDA DDLANRVKGL GAKSVAHLEA AGLTIGGSTT 
PPTGAKAKTG TAKPAATATP APAPAPAPTT SSATPAPSAA TPAPATATPS TAASAPAAKK 
SRSSKKQDKA AAASAAAQAS APAAASTTKA KGSKKSKKNK AATPASAASG A