Gene BURPS668_2187 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBURPS668_2187 
Symbol 
ID4882207 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia pseudomallei 668 
KingdomBacteria 
Replicon accessionNC_009074 
Strand
Start bp2180006 
End bp2181151 
Gene Length1146 bp 
Protein Length381 aa 
Translation table11 
GC content69% 
IMG OID640128115 
ProductPQQ repeat-containing protein 
Protein accessionYP_001059222 
Protein GI126442184 
COG category[S] Function unknown 
COG ID[COG1520] FOG: WD40-like repeat 
TIGRFAM ID[TIGR03300] outer membrane assembly lipoprotein YfgL 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.508226 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATCTGC TGAAACGTTA CGCTGCACCC GTTGCCTGCG CGGCGGCCGT CCTGGTTCTC 
GCGGCCTGTT CGTCAACGAA GGACGCGCGC CGCGTGCCGA CGCCGCTCAC CGAGTTCAAA
CCCGTGCTCG ACGTGCAGCA GGTGTGGACG GCGAGCGTCG GCAAGGGCGG CCGCTACTCG
TTCTCGCCCG TCGCGGTGGG CGACGCCGTG TATGTCGCCG GCGCGAACGG TTCGGTCGAG
AAGATCGACG CGAAGACGGG CCAGCAAGTC TGGCGTGCGA AGATCGGCTC GGACTTGTCG
GCGGGCGTCG GCAGCGACGG CAACCTGACC GCGGTCGGCG CGCTGAAGGG CGGCGTGTTC
GTGCTCGGCC CGGACGGCAA GCAGTTGTGG AAAGCCACCG TGCAAGGCGA GATCTTCTCG
CCGCCGCTCG TCGGCAACGG TCTCGTGATC GTGCGCACGA TCGACGGCCA GGTGATCGCG
TTCGCCGCGC AGACGGGTGA GCAGAAGTGG ACTTACCGCA ACCGCGCGGT GCCGCTGAAC
CTGCGCGTGT CGGCCGGCAT GACGTTCGCG GGCGACGCCG CGGTGCTCGC GGGCTTCCCG
GGCGGCGGCC TCGTCGCGCT GAACCTGCAG ACGGGCGAGC CGTTCTGGCA GACGCCCGTG
TCGTTTCCGA AAGGCGTGAC CGAAGTCGAG CGGATCAACG ACGTGACGGG CGCGCCGACG
CTCGTCGGCG CCGAGACGTG CGCGGTGACG TTCCAGGGGC AGCTCGGCTG TTTCGATGCG
AACTCGGGCC GCCCGTTGTG GGAAAAGCCG TTTTCGAGCC GCAGCGGCGT CGCGCAGGAC
GATACGGTCG TCGTGGGCGG CGACGACTGG TCGGTCGTGT CGGCTTACGA CGTCGCGACG
GGCAAGGCGC TCTGGCGCAA CGACAAGCTG AAGAGCCGCG ACGTCGGCGT GCCGTACCTG
CTCGGCCGCG CGGTCGTGCT CGGCGACTAC AAGGGCTTCG TGCATTTCCT GTCGCGCGAT
GACGGCACGT TCGTCGCCCG GATGAAGACG GACGGCAGCG CGATCGCCGC CGCGCCCGTG
CTTGCCGGCA ACACGCTCGT CGTCCTGACG CAGGACGGCG GCGTATACGG TTTCCGTCCG
CGCTAA
 
Protein sequence
MNLLKRYAAP VACAAAVLVL AACSSTKDAR RVPTPLTEFK PVLDVQQVWT ASVGKGGRYS 
FSPVAVGDAV YVAGANGSVE KIDAKTGQQV WRAKIGSDLS AGVGSDGNLT AVGALKGGVF
VLGPDGKQLW KATVQGEIFS PPLVGNGLVI VRTIDGQVIA FAAQTGEQKW TYRNRAVPLN
LRVSAGMTFA GDAAVLAGFP GGGLVALNLQ TGEPFWQTPV SFPKGVTEVE RINDVTGAPT
LVGAETCAVT FQGQLGCFDA NSGRPLWEKP FSSRSGVAQD DTVVVGGDDW SVVSAYDVAT
GKALWRNDKL KSRDVGVPYL LGRAVVLGDY KGFVHFLSRD DGTFVARMKT DGSAIAAAPV
LAGNTLVVLT QDGGVYGFRP R