| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS668_2166 |
|---|
| Symbol | phbC |
|---|
| ID | 4883804 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia pseudomallei 668 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009074 |
|---|
| Strand | - |
|---|
| Start bp | 2157233 |
|---|
| End bp | 2159032 |
|---|
| Gene Length | 1800 bp |
|---|
| Protein Length | 599 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 640128094 |
|---|
| Product | Poly-beta-hydroxybutyrate polymerase |
|---|
| Protein accession | YP_001059201 |
|---|
| Protein GI | 126441293 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG3243] Poly(3-hydroxyalkanoate) synthetase |
|---|
| TIGRFAM ID | [TIGR01838] poly(R)-hydroxyalkanoic acid synthase, class I |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCAACAGT TGTTCGAGTC CTGGCTCGGC GCGTGGCGCA GCTTCGCGGA CCCGGCCCGG
GCGGCCGCGG GCGACGCACC GTCGCCGTCG CCGTTCGCGG CGTTCCAGCC GCCGCAGCCG
TTTGCGTTCG CGATGCCTGC GATGCCGCCG ATGCCGGATT GGTCCGGCGC GGCCGCGTCG
TTCGCGGGGC TCGCGCCCGT CGCGTCGGTG CCGCCCGCGC GGCTGCAGAA GCTGCAGGCC
GATTACTCGC GCGATTGCCT CGCGCTGATC CAGCAGGCGA GCGCCGCGAC GCCGACCGTT
CCCGAGCTGA AGGACCGGCG TTTCAGCGCG GACGCCTGGA AGGCATCACC CGCGCACGGG
TTCGCGGCCG CCTGGTATCT GCTGAACGCG CGCTACCTGC AGGAGCTCGC GGACGCGCTC
GAGACCGACC CGAAGACGCG CGAGCGGATC CGCTTCACGG TCCAGCAATG GACGGCCGCC
GCGTCGCCGA GCAACTTCCT CGCGCTCAAT CCGGAGGCGC AGAAGAATCT CGTCGAGACG
CAGGGCGAGA GCCTGCGTCT CGGGATGATG AACCTGCTCG CCGACATGCA GCGCGGCAAG
ATTTCGCAGA CGGACGAATC ACAATTCGTC GTCGGCAAGA ATCTCGCGGT GACGCCGGGC
GCGGTCGTCT ACGAGAACGA TCTGATCCAG TTGATCCAGT ACACGCCCAC GACAGCCACC
GTCTTCGAGC GGCCGCTGCT CATCGTGCCG CCGTGCATCA ACAAGTTCTA CATCCTCGAT
CTGCAGCCGG AGAATTCGCT CGTCGCGCAC GCGCTGTCGT GCGGCCATCA GGTGTTCCTC
GTGTCGTGGC GCAATGCCGA CGCGTCGGTC GCGCACAAGA CGTGGGACGA CTACATCGAC
GAGGGCCTGC TCGCCGCGAT CGACGTCGTC CAGCAGGTGA GCGGGCGCGA GCAGATCAAC
ACGCTCGGCT TCTGCGTCGG CGGCACGATG CTTGCGACGG CGCTCGCGGT GCTCGCCGCG
CGCGGCGAGC ACCCGGCCGC GTCGATGACG CTGCTCACCT CGATGCTCGA CTTCTCCGAC
ACGGGCATTC TCGACGTGTT CGTCGACGAG GCGCACGTGC AGATGCGCGA GCAGACCATC
GGCGGCAAGG GCGGCGCGCC CGCGGGCTTG ATGCGCGGCG TCGAGTTCGC GAACACGTTT
TCGTTTCTGC GTCCGAACGA TCTCGTGTGG AACTATGTCG TCGACAACTA CCTGAAGGGC
CGCACGCCCG CGCCGTTCGA TCTGCTGTAC TGGAACGGCG ATTCGACGAG CCTGCCCGGC
CCGATGTACG CGTGGTATCT GCGGAATACC TATCTCGAAA ACAAGCTGCG CGAGCCGGAT
GCGCTCACGG TGTGCGGCGA GCCCGTCGAT CTGTCGCGCA TCGATGTGCC GACGTTCATC
TACGGCTCGC GCGAGGATCA CATCGTGCCG TGGCAGACCG CGTACGCGTC GACGTCGCTG
CTGACGGGGC CGCTGAAGTT CGTGCTGGGC GCGTCGGGCC ACATCGCAGG CGTGATCAAT
CCGCCCGCGA AGCGCAAGCG CAGCTACTGG AGCTACGACG CGAGCGCGAA GGAGCTGCCG
GAATCGGCGA ACGACTGGCT CGATGCGGCC GTCGAGCACC CTGGCAGTTG GTGGCCGGTA
TGGATCGAGT GGCTCGATCA GTACGGCGGC AAGAAGGTGA AGCCGCGCGC GCACCTCGGC
TGCGCGCGCT TCCCGGTGAT CGAGCCCGCG CCCGGCCGAT ATGTGTTGCA ACGCGATTGA
|
|---|
| Protein sequence | MQQLFESWLG AWRSFADPAR AAAGDAPSPS PFAAFQPPQP FAFAMPAMPP MPDWSGAAAS
FAGLAPVASV PPARLQKLQA DYSRDCLALI QQASAATPTV PELKDRRFSA DAWKASPAHG
FAAAWYLLNA RYLQELADAL ETDPKTRERI RFTVQQWTAA ASPSNFLALN PEAQKNLVET
QGESLRLGMM NLLADMQRGK ISQTDESQFV VGKNLAVTPG AVVYENDLIQ LIQYTPTTAT
VFERPLLIVP PCINKFYILD LQPENSLVAH ALSCGHQVFL VSWRNADASV AHKTWDDYID
EGLLAAIDVV QQVSGREQIN TLGFCVGGTM LATALAVLAA RGEHPAASMT LLTSMLDFSD
TGILDVFVDE AHVQMREQTI GGKGGAPAGL MRGVEFANTF SFLRPNDLVW NYVVDNYLKG
RTPAPFDLLY WNGDSTSLPG PMYAWYLRNT YLENKLREPD ALTVCGEPVD LSRIDVPTFI
YGSREDHIVP WQTAYASTSL LTGPLKFVLG ASGHIAGVIN PPAKRKRSYW SYDASAKELP
ESANDWLDAA VEHPGSWWPV WIEWLDQYGG KKVKPRAHLG CARFPVIEPA PGRYVLQRD
|
|---|
| |