| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS668_2151 |
|---|
| Symbol | |
|---|
| ID | 4882563 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia pseudomallei 668 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009074 |
|---|
| Strand | - |
|---|
| Start bp | 2140878 |
|---|
| End bp | 2143370 |
|---|
| Gene Length | 2493 bp |
|---|
| Protein Length | 830 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 640128079 |
|---|
| Product | AsmA family protein |
|---|
| Protein accession | YP_001059186 |
|---|
| Protein GI | 126442300 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG2982] Uncharacterized protein involved in outer membrane biogenesis |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCGCTCA CCCGTACTCT TGGCAAAACG GCGGCGTGGA TCGTCGGCAT CTTCGCGGTC
TTGACCGCGG CGGTCGGCGT GTTCATCTTC ACGTTCGACT GGAATCGCGC GAAACCGTGG
ATCAACGAGC AGGCAAGCGC GTCGATCGGC CGGCCGTTCG AGATCCGCGG CGACATCAAG
GTCGGCTGGC GGCGGCCCGA CGGCGAGACC GGCTGGCGCG CATGGGTGCC GTGGCCGGTG
TTCTCGGCGA GCCGGATCGT GATCGGCAAC CCGCCGTGGG CGAAAGCGCC CAATTTCGCG
ACGCTCGACG AAGCGCGCTT CGAGCTCGCC GTCCTGCCGC TGCTCGCGCA CGAGGTCGTG
ATCCCGACGA TCGAGCTCGT CAACCCGGCG CTCGACATCG AGCGCCTCGC CGACGGCCGC
AACAACTGGA CCTTCGAATT CAAGCAGTCT GCCGGCCCGT CGCCCTGGAA GGTGCAGTTG
CGCGACTTCG GCTTCGCGAA GGGCACGGTC GTCTATCGCG ACGCGATCAC GAAAGCCGAT
CTGAGCGTCG CGGTCGATAC GCTCGGCCAG CCGATTCCGC TCGGCGACGT GCTCCGGCAG
CAGGAGGAGA CGTCTCGGGC GGCGTCGGCG CAGCGGGTCG GCAAACGCGG CGCGGCGCAA
TTGGCCGCCA AGGCGCAAGC CCAGATCGCG TCCGACGCGT CGGCGGCGTC GGCCGCCGGG
GCGCCGAACG CGAGCGGCGC TGCCGCGGCG AGCGGCGCGT CGGGCGTGAA TGCCGCGGCG
TCGGCCGCCA AGGTTTCCGG CAATGACCGG TCACGGGCGG CTCGGGCCAC GGCGGGCGCG
AGCGCTGCGT CGAAGCCGGC CGCCGCGGCC TCCGGCGGGA GCGCCGCGGC GGTTGCCGCC
GGCAAGGCTC CCGCAGCGGG CGCGGGCGGG GCGGTTGCTT CCGCCTCCGC GTCGGCCGCA
TCTTCCGCTT CGGCCGTCTC GACGAGCGCG GCCGTTTCGG GCGCGAGCGG CGCAAGGGGC
GCGAGCGGCG CAAGCGCGGC CTCCGCCGCC GAGCAGCGGT CGGCCGGACC GACCTACGCG
TTCGGCCTGA CCGTGAAGGG CCGCTACAAG GGCGTGCCGA TCGACGGCAC GGGCAAGGTG
GGCGGCGTGC TGTCGCTTCG GGACGCTTCG CGGCCATTCC CGCTGCAGGC CGACGTGAAG
GCGGGCGACA CGCGCCTCGC GATCGTCGGG ACGCTCACCG ATCCGGTCCA TCTCGCCGCG
ATCGACCTGC GGCTGTGGCT GCAGGGCTCG AGCATGTCGC ACCTGTATCC GCTCACGGGC
GTGACCTTGC CCGACACGCC GCCGTACGCG ACCGAAGGCC GGCTCGTCGG TCGTTTCAAG
CGCGCCGCGA GCACGTTCCG TTACGAGAAC TTCAACGGCC GCGTCGGCGG CAGCGATCTG
CGCGGCACGC TCGTGTACCA GCAGCGCGCG CCGCGGCCGC TCCTGTCCGG CGAGCTCGTG
TCGAATCTGC TGCAGTTCTC CGATCTCGCG CCGATCATCG GCGCGGACAC GGCCGCGAGC
AAGGCGCGGC GCGGCGACAC GACGAAGCAG CCGCCCGGCC GCGTGCTGCC CGTCGAGACA
TTCCGCACCG ACCGCTGGCG CGCGCTCGAC GCCGACGTCA AGTTCACGGG CCGCAAGCTG
ATCAAGAGCG CCGCGCTGCC GATCAGCGAT CTGTACACGC ACATCGTGAT GACGGACGGC
GTGCTGTCGC TCGAGCCGCT GAAGTTCGGC GTCGCGGGCG GCTCGCTCGC GACCACCGCT
CATCTCGACG GCAGCGCCGC GCCGCTGAAG GGCCGCTTCT CGGTCGCCGC GCGGCATCTG
AAGCTCAAGC AGCTGTTCCC GACGCAGAAG GTCATGCAGT CCGCGCTCGG CGAGATCAAC
GGCGATGCGG CGCTGTCCGC GACGGGCAAT TCGCCCGCCG CGCTCGCGGC GACGTCGAAC
GGCGAAGTGA AGATGCTGAT GACCGATGGC GCGATCAGCC GCCTGTTGAT GGAAGCGGCG
GGCCTGAACG TCGCCAACGT CCTGTACGAA AAGATGTTCG GCAGCCACGA CGTGAAGATC
AATTGCGCGG CCGTCGATTT CGTGGCGACC AACGGCTTGC TCGACACGAA GCTGTTCGCG
TTCGATACCG ACGACGCGCT CATCAACATC GACGGCCCGA TCGATCTGCG CAACGAGTCG
ATGAACCTGA AGGTCCATCC GCATACGAAG GGATTCCGCG TGTTCTCGCT GCGCTCGCCG
CTGTACGTGA AGGGGACGTT CAAGAATCCG GACGTCGGGG TCGACGCGGC CGCGCTCGCG
TTGCGCGCGG GCGCGATGGT CGGCCTCGGG CTCGTGAATC CGTTCGCGGC GCTGATTCCG
CTGATCGCGC CGAGCAATAA CCGGGACGTG CCGTGCTCGG AGCTCTTCGC GCAGTTGAAG
GCGCCGCAGA AGGCCGCGAA CGCGCGCAAG TGA
|
|---|
| Protein sequence | MALTRTLGKT AAWIVGIFAV LTAAVGVFIF TFDWNRAKPW INEQASASIG RPFEIRGDIK
VGWRRPDGET GWRAWVPWPV FSASRIVIGN PPWAKAPNFA TLDEARFELA VLPLLAHEVV
IPTIELVNPA LDIERLADGR NNWTFEFKQS AGPSPWKVQL RDFGFAKGTV VYRDAITKAD
LSVAVDTLGQ PIPLGDVLRQ QEETSRAASA QRVGKRGAAQ LAAKAQAQIA SDASAASAAG
APNASGAAAA SGASGVNAAA SAAKVSGNDR SRAARATAGA SAASKPAAAA SGGSAAAVAA
GKAPAAGAGG AVASASASAA SSASAVSTSA AVSGASGARG ASGASAASAA EQRSAGPTYA
FGLTVKGRYK GVPIDGTGKV GGVLSLRDAS RPFPLQADVK AGDTRLAIVG TLTDPVHLAA
IDLRLWLQGS SMSHLYPLTG VTLPDTPPYA TEGRLVGRFK RAASTFRYEN FNGRVGGSDL
RGTLVYQQRA PRPLLSGELV SNLLQFSDLA PIIGADTAAS KARRGDTTKQ PPGRVLPVET
FRTDRWRALD ADVKFTGRKL IKSAALPISD LYTHIVMTDG VLSLEPLKFG VAGGSLATTA
HLDGSAAPLK GRFSVAARHL KLKQLFPTQK VMQSALGEIN GDAALSATGN SPAALAATSN
GEVKMLMTDG AISRLLMEAA GLNVANVLYE KMFGSHDVKI NCAAVDFVAT NGLLDTKLFA
FDTDDALINI DGPIDLRNES MNLKVHPHTK GFRVFSLRSP LYVKGTFKNP DVGVDAAALA
LRAGAMVGLG LVNPFAALIP LIAPSNNRDV PCSELFAQLK APQKAANARK
|
|---|
| |