| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS668_2086 |
|---|
| Symbol | |
|---|
| ID | 4885416 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia pseudomallei 668 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009074 |
|---|
| Strand | - |
|---|
| Start bp | 2071678 |
|---|
| End bp | 2074686 |
|---|
| Gene Length | 3009 bp |
|---|
| Protein Length | 1002 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 640128014 |
|---|
| Product | linear gramicidin synthetase subunit D |
|---|
| Protein accession | YP_001059121 |
|---|
| Protein GI | 126439535 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG1020] Non-ribosomal peptide synthetase modules and related proteins
[COG3320] Putative dehydrogenase domain of multifunctional non-ribosomal peptide synthetases and related enzymes |
|---|
| TIGRFAM ID | [TIGR01733] amino acid adenylation domain
[TIGR01746] thioester reductase domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGATT CGAACACCGT GCTCGAACGG GTGCGCGCGT GGTGCGCCGC CACGCCGCGG
GCCGTTGCCG TCGCGACCGC GGATGCGACG ATGACGTATG GCGAGCTCGA CCGCGCGAGC
GACGCCGTCG CCGCGTTTCT CGAGGCCGAG CGCATCGGTG CGGGCAGCAT CGTGCCGATC
GAGGCGATGC GCACGGACGA TTTCGTCGCG GGCATGCTCG GCATCGTGAA GGCGGGCGCC
GCGTACTGCC CGATCGATCA CGCGTATCCC GAAGCGCGCA AGACGCACAT CGTCGAGCGA
ACCGGCTCGC CGCTGCTGCT CACGGCCGTG TCGCCGCGCA CGCCGCTCGC GTGCGCGCGG
GCGCCGCGCA CCGCGAGCAT CGCGGCGCTG CGGCGCGCGG GGATGCCGCG TTCGGCGTCG
CCGCGCACGC CGCGGCCGAA CGACGCGATC TACGTGATCT TCACCTCGGG TACGACGGGT
GTGCCCAAGG GCGTCGTCGT CGAGCATCGC TCGGTCGACG GGCTGATCGC GTGGCACAAC
GCGCAGTTCG GCGTCGACCG CACGAGTCGC TCGACGCAGA TCGCCGCGCT CGGCTTCGAC
GCCGCGCATT GGGAGATCTG GTCGCCGCTT TGCGCGGGCG CGCGGCTGCG CTTCGTCGAC
GACGACGCGC GGCGCGACGC GAACGCGCTC GTCGCGTTGC TCGAGCGCGA GCGGATCACG
CATGCGTTCG TGCCGACGGT GATGGCGCGC GACGTCGTGG CCGCGAGCGA ACCGGGCCCG
TCGGCGCTGC GCTATCTGTT CACCGGCGGC GAGAAGCTGA ATCCGGTCGA CACGGACCGC
ATCCGTTATC GGCTGATCGA CTACTACGGG CCGACCGAGG CGACGATGTG GGCGAGCTTT
CATCCGGTGC AAAGCGCGAG CCTCGGCTTG CCGCCGTCGA TCGGCACGCC GGTCGGCGGC
GCGCGAATCG CGATATTCGA CGAGCGACTG CGCGAGGCGC AGAGCGGTGC CGTCGGCGAG
ATTGTCATCT CGGGCCCGTG TCTCGCGCGC GGCTATCTCG ACGATCCGAG GCAGACCGCG
GAGAAGTTCC TTGCGCATCC GTCGCGCCCC GGCGAGCGCG TCTATCGGAC GGGCGACCTC
GGGCGCCGGC TGCCCGACGG CGCGATCCAG TTCGTCGGTC GCCTCGACGA TCAGGTGAAG
ATCCGCGGCT ATCTCGTCGA GCCGGGTGAG GTCGAGATCG CGATCGCGCG GCAGTCGGGC
GTGCGCCGGG TCGCCGTCGT CGCGACGTCG CCCGCCGACG GCGCGCCGAG AGAACTCGTC
GCGTTCGTCG TGCCGGCCGA TCCGGCCGCG CCGCGCCGGC CGCTCGTCGG CCGCCTGCGC
GCGGGCGTGG CCGCATCGCT GCCGCCTTTC ATGGTGCCCG GGCATTTCGC GATCGTCGAC
GCGCTGCCGC TGTCCGCGAA CGGCAAGACC GACAAGGCGG CGCTCGTCGC GATGCACGGG
CGGCGCGCCG CGCGCGCGGA TTTCGCGGAG GTGGCCGACG CCGTCGAGCG CACGGTGTGC
GAATCGTTCG CCGACGCGCT CGGCCATGCG GATTTCGGCG TCGATGACAG CTTCTTCGAC
GTGGGCGGCC ATTCGCTCGT CGCGGCGGCC GCCGTCGCGT CGCTGTCCGC GCGGGTCGGC
GTCGCGCTGC GTCTGTCCGA TCTGTACAGG CGGCCGTCCG CCGCGGCGCT CGCGGTCGAC
ATCAGGCGAA GGCCGTCGGC CGGCGATCCG GGCGCCCTCG ACCTGACGCC CGCCGACGTG
CTGCGCCGCG ATGCGATCCT GCCGGAGGAC ATCGCGTTCG ACGGCGCGTT CGATCCGCAG
CGGCTCGCGC GCCCGGCGCA CGTGCTGCTG ACGGGCGCGA CGGGCTTCGT CGGCGTGCAT
CTGCTCGCGC AGTTGCTGGC CACCACGGAG GCGGTGATCC ATTGCGTCGT GCGGGCGCGG
GACGCGCACG ACGCCGAGCG GCGGGTCGCC GACAAATTGC GCACCTACCG GCTCGGCGTG
TCCGAGCGCG ATCGCGCGCG CATCCGGTGC CACGCCGGGG ACATCGCGCA CGACAGGCTC
GGCATGGCGA GCGCGGATTA CGACGCGCTC AGCCGGTGCG TCGACGTCGT CCATCATTCG
GCGAGCGCGG TCAACTTCAT CAAGCCGTAT GCGGCGATGA AGCGCGACAA CGTCGACGGG
CTCGTCAACG TGATCCGGTT CGCCGCCGCC GCGCGCGTGA AGGCGCTGTC GCTGCTGTCG
ACGATCTCGG TCTATAGCTG GGGGCACCGG ATCACGGGCA AGACCGTGAT GCGAGAGGAC
GACGACCTCG ACCAGAATCT CGACGCCGTG TGCGCCGACA TCGGCTACGT GAAGAGCAAA
TGGGTGATGG AGAAGCTCGC CGACGCGGCG CGCGCGCGCG GGCTGCCGCT TATCACGTTT
CGCGTCGGCT ACGCGACGTA TCACGCGCAG ACCGGCCTGA GCGCCGACTA CCAATGGTGG
GGGCGGCTCG TGAAGACGTG CATCGCGCTG CGCGCGGTTC CCGAGCTGCG CGAGCTTCGC
GAGGGCTTGA GCACCGTCGA CTACATGACG GCGGCGATCG CGCACATCGC GCGCAATCCG
GCCGCGCCTG GCAAGAAATT CAACCTGACG CATTCGGGCG AGCGCAACCT GTCGCTCGAG
GATTTTTTCG ACCGGCTCGA GCGCGCGTTC GGCTTTTCGT TCGCGCGGGT GCCGTTTCGC
GACTGGTTCG ACCGCTGGAA GGACGACGCC GCGACGCCGC TCTATCCGGT GCTGAACCTG
TTTCGCGACC CGATGCACGG CGGCATGTGC ATGGTCGAGC TGTATCAGCA CACCTACCGG
TGGGAGCACG CGAACACGTC GGCGTTCCTC GCGGGCAGCG GCGTGCGGCC GCCCGAATTC
GACGAGCCGG AGCTGCGCCG CTATCTCGTG CAATCGATCG GCATCGCGCC GGCGTGCGCC
GCGCGCTGA
|
|---|
| Protein sequence | MSDSNTVLER VRAWCAATPR AVAVATADAT MTYGELDRAS DAVAAFLEAE RIGAGSIVPI
EAMRTDDFVA GMLGIVKAGA AYCPIDHAYP EARKTHIVER TGSPLLLTAV SPRTPLACAR
APRTASIAAL RRAGMPRSAS PRTPRPNDAI YVIFTSGTTG VPKGVVVEHR SVDGLIAWHN
AQFGVDRTSR STQIAALGFD AAHWEIWSPL CAGARLRFVD DDARRDANAL VALLERERIT
HAFVPTVMAR DVVAASEPGP SALRYLFTGG EKLNPVDTDR IRYRLIDYYG PTEATMWASF
HPVQSASLGL PPSIGTPVGG ARIAIFDERL REAQSGAVGE IVISGPCLAR GYLDDPRQTA
EKFLAHPSRP GERVYRTGDL GRRLPDGAIQ FVGRLDDQVK IRGYLVEPGE VEIAIARQSG
VRRVAVVATS PADGAPRELV AFVVPADPAA PRRPLVGRLR AGVAASLPPF MVPGHFAIVD
ALPLSANGKT DKAALVAMHG RRAARADFAE VADAVERTVC ESFADALGHA DFGVDDSFFD
VGGHSLVAAA AVASLSARVG VALRLSDLYR RPSAAALAVD IRRRPSAGDP GALDLTPADV
LRRDAILPED IAFDGAFDPQ RLARPAHVLL TGATGFVGVH LLAQLLATTE AVIHCVVRAR
DAHDAERRVA DKLRTYRLGV SERDRARIRC HAGDIAHDRL GMASADYDAL SRCVDVVHHS
ASAVNFIKPY AAMKRDNVDG LVNVIRFAAA ARVKALSLLS TISVYSWGHR ITGKTVMRED
DDLDQNLDAV CADIGYVKSK WVMEKLADAA RARGLPLITF RVGYATYHAQ TGLSADYQWW
GRLVKTCIAL RAVPELRELR EGLSTVDYMT AAIAHIARNP AAPGKKFNLT HSGERNLSLE
DFFDRLERAF GFSFARVPFR DWFDRWKDDA ATPLYPVLNL FRDPMHGGMC MVELYQHTYR
WEHANTSAFL AGSGVRPPEF DEPELRRYLV QSIGIAPACA AR
|
|---|
| |