Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BURPS668_2033 |
Symbol | |
ID | 4885522 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia pseudomallei 668 |
Kingdom | Bacteria |
Replicon accession | NC_009074 |
Strand | - |
Start bp | 2029202 |
End bp | 2029732 |
Gene Length | 531 bp |
Protein Length | 176 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 640127961 |
Product | fimbrial protein |
Protein accession | YP_001059068 |
Protein GI | 126439842 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG3539] P pilus assembly protein, pilin FimA |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 0.833658 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAGCAA AAGGAATGCA ATACGGCCTG ACGGCTGTTC TGCTGTCGAT GCTCTCGGGC GGCGCGGCTT ATTCGCAGAC CGCGACGACC GGCACCATCA ATTTCACCGG CAGCATCACC GACGTGCCGT GCGAAATCGA CACGGCCGCC ACCAGCAGCA ACGTGACGAT GGCCAAGGTT TTCGCGAATG ACTTCAGCGG CGTGGGGTCG ACCACCGGCA CGACGGCATT CAAGATCGTC CTCAAGAATT GCGGCGCGTC GACGAGCGGC GCGACGGTGC GCTTCATGGG CACGACTGAC AGCGCCAATC CCGCGGCGCT CCAGACGACC GCGGGCGGAG CGGGAGGGGT CGCGTTGCAG CTCGTCGACG ACACCGGCAC GCCGATCAGT ATCGGCTCGA GCAGCAAGGC ATACACGATT GCCGAGGGCG ACAACACGTT CAATTTCGCG GCGCGCTATA TCGCGACGTC CGCGACCGTG ACGGGCGGCG CGGCCAATGC CACGGCGGTA TTCGCGCTGA CGTACAAGTA G
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Protein sequence | MKAKGMQYGL TAVLLSMLSG GAAYSQTATT GTINFTGSIT DVPCEIDTAA TSSNVTMAKV FANDFSGVGS TTGTTAFKIV LKNCGASTSG ATVRFMGTTD SANPAALQTT AGGAGGVALQ LVDDTGTPIS IGSSSKAYTI AEGDNTFNFA ARYIATSATV TGGAANATAV FALTYK
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