Gene BURPS668_1964 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBURPS668_1964 
Symbol 
ID4884075 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia pseudomallei 668 
KingdomBacteria 
Replicon accessionNC_009074 
Strand
Start bp1942393 
End bp1943187 
Gene Length795 bp 
Protein Length264 aa 
Translation table11 
GC content72% 
IMG OID640127892 
Productshort chain dehydrogenase 
Protein accessionYP_001058999 
Protein GI126442266 
COG category[R] General function prediction only 
COG ID[COG0300] Short-chain dehydrogenases of various substrate specificities 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGGGTA AACGCATTCT GGTGACGGGC GCGGGCTCGG GTTTCGGCCG CGAGGTCGCG 
CTGCGGCTCG CCGCGAAGGG CCATTGCGTG ATCGCGGGGG TGCAGATCGC CCCGCAGATC
ACCGAGCTGA GCGCCGAGGC CGCGCGGCGC GGGCTCGCGC TCGACGCGGT GAAGCTCGAC
GTGACGTGCG CGCGCGAGCG CGCGCAGGCC GCGCGCTGGG ACGTGGACGT GCTGTTGAAC
AACGCGGGCG CGGGCGAGGC GGGCGCGCTC GTCGATCTGC CCGTCGACAT CGTTCGCGAG
CTGTTCGAGA CCAACGTGTT CGGCCCGCTC GAGCTCACGC AGCAGGTCGC GCGCGGGATG
ATCGCGCGCG GGCGGGGCAG GATCGTGTTC GTGTCGTCGA TCGCGGGGCT CATCACGGGC
GCGTACACGG GCGCGTACTG CGCGTCGAAG CACGCGCTCG AGGCGATCGC CGAGGCGATG
CACCTGGAAC TCGCCGCGCA TGGCGTCCAG ATCGCGGTCG TCAACCCGGG GCCGTACCGC
ACGGGCTTCA ACGACCGGAT GATGGAGACG CCGCGCCGCT GGCTCGACCC GGCGCGCGAC
GCGGCGACGC CCGAGACGCT CACGTTCCCG CTCGAGCAGT TCGATCCGCA GGAGATGATC
GAGAAGATGG TCGACGTGAC CGAGGCCGAC GGCGGGCTGT TCCGCAATCT GCTGCCCGCC
GCCGCCGAGC AGATCGTGCG CGACGAGCAG GCGCACGCGT GGACGCGCCG TCAGAACGAG
CGGCGCGGCG CGTGA
 
Protein sequence
MTGKRILVTG AGSGFGREVA LRLAAKGHCV IAGVQIAPQI TELSAEAARR GLALDAVKLD 
VTCARERAQA ARWDVDVLLN NAGAGEAGAL VDLPVDIVRE LFETNVFGPL ELTQQVARGM
IARGRGRIVF VSSIAGLITG AYTGAYCASK HALEAIAEAM HLELAAHGVQ IAVVNPGPYR
TGFNDRMMET PRRWLDPARD AATPETLTFP LEQFDPQEMI EKMVDVTEAD GGLFRNLLPA
AAEQIVRDEQ AHAWTRRQNE RRGA