| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS668_1921 |
|---|
| Symbol | |
|---|
| ID | 4885669 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia pseudomallei 668 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009074 |
|---|
| Strand | + |
|---|
| Start bp | 1880236 |
|---|
| End bp | 1882356 |
|---|
| Gene Length | 2121 bp |
|---|
| Protein Length | 706 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 78% |
|---|
| IMG OID | 640127849 |
|---|
| Product | iron-hydroxamate transporter permease subunit |
|---|
| Protein accession | YP_001058956 |
|---|
| Protein GI | 126441585 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0609] ABC-type Fe3+-siderophore transport system, permease component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.403612 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACGGCGC TCGCGGTTCG CAAGCGGCTG CGTCACGGCG GGCGCGCGCC GGAATCCTCG
CCGGCGTCGC GCGCGGCGGC GCCCGGGCGC GTCGGCGCGA TCGCGGGCGC GCTCGTCGCG
CTGATCGTCG TCACGGCGGC GATGCGGCTC GCGCCCGAGC TGCGCGCGTG GCTTGCCGCG
CCGGCAGGCG GCGACGCCGC GCAGCTCGCG CATATCATGC TGTTCGATCT CGCCGCGCCG
CGCGTCGCGG CGGCGCTCGT CGCGGGCGGC TGCCTCGCGG CCGCGGGCGC GCTGCTGCAG
TCGCTCACGC GCAACCCGCT CGCCGCGCCG GACCTGCTCG GCATCACGGG CGGCGCGCAG
CTCGGGCTGA TCGCCGCGAT GCTCGTGCCC GCGCTCGCCG GCCATGCGTC GGTGCCGCTC
CTGTTCGTCT GCGGGCTCGC CGCGGCCGCG TGCGTGTCGG CGGCGGCGGG CGGCTGGCGC
GCGACGCCGC TGCGCCTCAT TCTCGCGGGC AGCGTCTGCA TGCTGCTGTT CTCGGCGGTC
ACGACGCTGC TGCTCGCGTT CTTCGAGCAG ACGGTGGTCG GCGCGTCGCT GTGGGCGAGC
GGCAGCCTGT ACCAGCCGGG CGCGGCCGGG CTGCGCGACG CGCTGCGGTG GCTCGTCGCG
CCGCTCGCCG CGCTGCCGCT CGTGATCCGG CCGCTCGATC CGCTCGCGCT CGGCGACGAC
GCCGCGGCCG CGGCCGGCGT GCGCGTCGAC GCGACGCGGC TCGCCGGCAC CGTCGTCGCG
GTCGGCTTCG CGAGCGTCGC GGTCAGCATC GCGGGGCCGC TGTCGTACAT CGGCCTGATC
GCGCCGAACC TGATCCGGCA GATGCGCGGC GCGAAGGCGT CGAGGCTCGG CGCGCTCGTG
CCGCTCGCCG CGCTCGCGGG CGGCGCGCTC GTGCTCGTCA CCGATAGCGC CGTGCTCGCG
CTCGGCCTCG ATGCGACGCT GTCGACGGGC GTCGCGATCG CGTTCGTCGG CACGCCGCTG
ATGCTCGCGA TGATCCGCCG CGGCGCCGCA TGGTCGGGCG CCGCGCAGCA GCCGGCGCAC
GCGCGGGCGG GCACGCGCGG CGGCGCGCGG CTCGAGCGCG CGCTCGCCGT GCTGCCGTGG
CCCGCCGTCG CGGTGCTGCT GCTGGCGGCG GGCGCCGCGG TGCTCGTCGT CGGCGCGTCG
TTCGGCCCGG TGTGGATCGG CCCCGGGCGC TGGTTCGCGG CGCTCGCGCA GCGCGACGAC
CTCGCGCGGA CGGTGCTCGA TCTGCGCGCG CCGCGGCTCT TGTGCGCATT GCTCGCGGGC
GCGCTGCTCG GCGCGTCCGG CGTGCTGATG CAGAGCATCG TGCGCAATCC GCTCGCGGGG
CCCGAGGTGC TCGGCGTCAC GCAGGGCGCG GGGCTCGCGA CGCTCGCCAC GCTCGTCGCG
TGGCCGCTCG CCGCGCACGG CACGCTCGTC GCCGCCTCGC TCGCGGGCGG CGGCGCGACG
CTCGTGCTCA CGCTCGCGCT CAACCGCCGG CATCGCTACG CGCCGCTCGC GGTCGCGCTG
ACGGGCATCG TGATCGGCAC GCTGTGGACG ACGCTCGCGC AATGGCTGAT CACGCAGGAG
AGCGTGCAGC CCGCGCGCTT CGTCGTCTGG CTCGTCGGCG GCACGTATGG GCGCAGCTGG
GGCGAGGCGG CCGCGCTGCT GCCGTGGGGC GCGCTCGCGG TGCCGGCGCT CGCGCTGCTC
GCGAGGCCGC TCGATCTGCT CGCGCTCGGC GACGAACAGG CGGCCGCGCT CGGCCTGCCG
ATCGCCGTGC TGCGCCCGCT CGTGCTGACG ATCGCGACGC TCGCCGCTTG CGCGGCCGTG
GCGGCGGTCG GCCCGGTCGG CTTCATCGGG CTGATGGCGC CGCATCTCGC GGCGATGCTC
GGCGCGCGCG CGCACGCAAC GCGCCTGTGG CTCGCCGCCG CGTGCGGCGC GCTCGTGCTC
GCCGCCGCCG ATATCGCCGC GCGCACGCTG CTCGCGCCGC GCGAGATTCC GGCGGGCGTG
CTGACCGCGC TGATCGGCGC GCCGTACCTG CTCGCGCTGC TGATCGCCGA AGCGCGGCGA
GAGCGGCGCG GCGGCCGATG A
|
|---|
| Protein sequence | MTALAVRKRL RHGGRAPESS PASRAAAPGR VGAIAGALVA LIVVTAAMRL APELRAWLAA
PAGGDAAQLA HIMLFDLAAP RVAAALVAGG CLAAAGALLQ SLTRNPLAAP DLLGITGGAQ
LGLIAAMLVP ALAGHASVPL LFVCGLAAAA CVSAAAGGWR ATPLRLILAG SVCMLLFSAV
TTLLLAFFEQ TVVGASLWAS GSLYQPGAAG LRDALRWLVA PLAALPLVIR PLDPLALGDD
AAAAAGVRVD ATRLAGTVVA VGFASVAVSI AGPLSYIGLI APNLIRQMRG AKASRLGALV
PLAALAGGAL VLVTDSAVLA LGLDATLSTG VAIAFVGTPL MLAMIRRGAA WSGAAQQPAH
ARAGTRGGAR LERALAVLPW PAVAVLLLAA GAAVLVVGAS FGPVWIGPGR WFAALAQRDD
LARTVLDLRA PRLLCALLAG ALLGASGVLM QSIVRNPLAG PEVLGVTQGA GLATLATLVA
WPLAAHGTLV AASLAGGGAT LVLTLALNRR HRYAPLAVAL TGIVIGTLWT TLAQWLITQE
SVQPARFVVW LVGGTYGRSW GEAAALLPWG ALAVPALALL ARPLDLLALG DEQAAALGLP
IAVLRPLVLT IATLAACAAV AAVGPVGFIG LMAPHLAAML GARAHATRLW LAAACGALVL
AAADIAARTL LAPREIPAGV LTALIGAPYL LALLIAEARR ERRGGR
|
|---|
| |