Gene BURPS668_1909 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBURPS668_1909 
Symbol 
ID4885033 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia pseudomallei 668 
KingdomBacteria 
Replicon accessionNC_009074 
Strand
Start bp1871496 
End bp1872515 
Gene Length1020 bp 
Protein Length339 aa 
Translation table11 
GC content72% 
IMG OID640127837 
Productcarbohydrate ABC transporter permease 
Protein accessionYP_001058944 
Protein GI126441404 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1172] Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.071894 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCATGACC GGACGGCCGC GCCGTCCTCC TCTTGCGCGC CCGCCGCCGC GAGCCCCGCT 
CGGGCCACGG GCCCCGCGCG CGCCGCGCAC GCGCTCGCCG CGCTGCGGCG CTCGACGACG
TTCTACCCGC TCGTCGGGCT CGTCGCCGTG TGCGTCGCGA TGGTGTTCGC GAGCGACAGC
TTCCTGAGCG CGGCGAACCT CGAGAACGTG CTGCGGCAGG TGTCGATCAA CGCGATCATC
GGCGTCGGGA TGACCTGCGT GATCCTGACG GGCGGCATCG ACCTGTCGGT CGGCTCGGTG
ATGGCGCTGT CCGGCACGCT CGCGGCGGGC CTTCTCGTCG CGGGCGCGAA CGGCGCGGCG
GCGCTTGCCG CGGGCATCGG CGTCGGGGTC GCGCTCGGCG CGGCGAACGG CCTGTTCGTC
GCGTTCGCCG GCATGCCGCC CATCATCGTC ACGCTCGCGA CGATGGGCAT CGCGCGCGGC
CTCGCGCTCA TCTACACGGG CGGCTACCCG ATCGACGGGC TGCCCGACTG GGTCCGCTTC
TTCGGCAGCG GCAAGGTGCT CGGCGTGCAA ATGCCCGTGC TGACGATGCT CGCGGTCTAC
GCGCTCGCGT GGCTGATGCT CGAGCGCATG CCGTTCGGCC GCTACGTCTA CGCGATCGGC
GGCAACGAGC ACGCGACGCG GCTCTCGGGC GTGCGCGTGT CGCGCGTGAA GCTGGCCGTC
TATACGTTCG CGGGGCTCAC GTCCGCGCTC GCCGCGCTCG TGCTGACGGG CCGCCTGATG
AGCGGGCAGC CGAACGCGGG GGGCGGCTTC GAGCTCGACG CGATCGCCGC CGTCGTGATG
GGCGGCACGT CGATCGCGGG CGGCCGCGGC TCGATCGTCG GCACGCTTGT CGGCGCGCTG
CTGCTCGGCG TGCTGAACAA CGGCCTGAAC ATGATCGGCG TGAATCCCTA CGTGCAGAAC
GTGATCAAGG GCGCCATCAT CCTGCTCGCG ATCTACATCG GCCGCGAGCG CCGCACGTGA
 
Protein sequence
MHDRTAAPSS SCAPAAASPA RATGPARAAH ALAALRRSTT FYPLVGLVAV CVAMVFASDS 
FLSAANLENV LRQVSINAII GVGMTCVILT GGIDLSVGSV MALSGTLAAG LLVAGANGAA
ALAAGIGVGV ALGAANGLFV AFAGMPPIIV TLATMGIARG LALIYTGGYP IDGLPDWVRF
FGSGKVLGVQ MPVLTMLAVY ALAWLMLERM PFGRYVYAIG GNEHATRLSG VRVSRVKLAV
YTFAGLTSAL AALVLTGRLM SGQPNAGGGF ELDAIAAVVM GGTSIAGGRG SIVGTLVGAL
LLGVLNNGLN MIGVNPYVQN VIKGAIILLA IYIGRERRT