| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS668_1898 |
|---|
| Symbol | yfcS |
|---|
| ID | 4885636 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia pseudomallei 668 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009074 |
|---|
| Strand | + |
|---|
| Start bp | 1860973 |
|---|
| End bp | 1861722 |
|---|
| Gene Length | 750 bp |
|---|
| Protein Length | 249 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 640127826 |
|---|
| Product | fimbrial chaperone yfcS precursor |
|---|
| Protein accession | YP_001058933 |
|---|
| Protein GI | 126439486 |
|---|
| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG3121] P pilus assembly protein, chaperone PapD |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 0.314465 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCGACA TGACCCATCG ATTCCCGTGC GCGGCGCGCG CACGGCGCGC GGCCGCCGCG
CTCTTCATCG CGCTGGCGGG CGCCGCGCAC GCGGCGATCG TGCCCGACCG CACGCGCGTG
ATCCTCAACG AAGGCGAGCA GGCCGCGATC GTGACGCTCT CGAACAAGAG CGATGCGTAT
CCGTATCTCG TGCAGTCGTG GCTCGAGGAC GAGCGCGGCA ACCGGATCAC GACGCCGCTG
ATGGTCGTGC CGCCGCTGCA GCGCGTCGAG CCGAAGGAGC GCAACGTGCT TCGCATCGCG
CGGATGCCAG GCGCGACGCT GCCCGCCGAC CGCGAATCGG TGTTCTATCT GAACATCCGC
GAGGTGCCGC CGAAGACGGA CACGCCGAAC GCGCTGCAAA TCGCGCTGCA CACGCAGATG
AAGCTGTTCT ACCGGCCGGC GGGCGTGCAG CCCGCGCGCG ACGAGGACCC GACGCTGCCG
ATGACGCTGC GCGTCGATGC GGCCGCGCGC AAGCTCGTGT TCGACAACCC GACGCCGTAC
CACGTGACGG TCGTCGCGCT CGCGGCGGGC GCGCACCGGG CGGCGCTGCC GCTCGATCCG
GTGATGGTGA ATCCGAAGAG CGCGGCGAGC GTGCCGTTCT CGGCGTCGGC GGCGGGCGGC
CTGTTCGTCA CGCACGTCGA CGACTACGGC GGCCAGGTGA CGGTCGAATA CACGTGCGAC
GGCCTCGCGT GCCGCAGCGT GAAGCGATGA
|
|---|
| Protein sequence | MTDMTHRFPC AARARRAAAA LFIALAGAAH AAIVPDRTRV ILNEGEQAAI VTLSNKSDAY
PYLVQSWLED ERGNRITTPL MVVPPLQRVE PKERNVLRIA RMPGATLPAD RESVFYLNIR
EVPPKTDTPN ALQIALHTQM KLFYRPAGVQ PARDEDPTLP MTLRVDAAAR KLVFDNPTPY
HVTVVALAAG AHRAALPLDP VMVNPKSAAS VPFSASAAGG LFVTHVDDYG GQVTVEYTCD
GLACRSVKR
|
|---|
| |