Gene BURPS668_1888 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBURPS668_1888 
SymbolamrR 
ID4885290 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia pseudomallei 668 
KingdomBacteria 
Replicon accessionNC_009074 
Strand- 
Start bp1849175 
End bp1849846 
Gene Length672 bp 
Protein Length223 aa 
Translation table11 
GC content70% 
IMG OID640127816 
Productmultidrug efflux operon transciptional regulator AmrR 
Protein accessionYP_001058923 
Protein GI126441931 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.103015 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCCCGCA AGACGCGCGA AGAATCGCTG AACACGAAGA ACCGGATCCT CGACGCCGCC 
GAGCTCGTGC TGCTGGAAAA GGGCGTCGGC CAGACCGCGA TGGCCGACAT CGCGGAGGCG 
GCCGGCATGT CGCGCGGCGC GGTGTACGGG CACTTCAACG GCAAGATCGA GGTGTGCGTC 
GCGGTGTGCG ACCGCGCGTT CTCGCGCGCG GTGGAAGGCT TCGACCTGTC CGACGAGCGG 
CCCGCGCTCG CGACGCTGCG CCTTGCCGCG TCGCACTATC TGCACCAGTG CGGCGAGCCC 
GGCTCGATGC AGCGCGTGCT CGAGATCCTC TACATGAAAT GCGAGCAGAG CGAAGAGAAC 
GCGCCGCTGA TGCGCCGGCG CGCGCTCTAC GAACTGCAGA CGCTGCGCAT CGCGAAGGCG 
CTGCTGCGCC GCGCGGTCGC CGCGGGCGAG CTCGACGCGT CGCTCGACGT GCACCTCGCG 
GGCGTCTATC TGCTGTCGCT GCTCGAAGGC ATCTTCGGCT CGATGATCTG GACCACCCGG 
CTGCGCGGCG ATCGCTGGCG TGACGCCGAG GCAATGCTCG ACGCGGGCGT CGACACGCTG 
CGCGCGTCGC CCGCGCTGCG CGTGGCCGAG GCTTGCGCGG CGCGCGGATT GCCGCGCGCA 
AACGTGCACT GA
 
Protein sequence
MARKTREESL NTKNRILDAA ELVLLEKGVG QTAMADIAEA AGMSRGAVYG HFNGKIEVCV 
AVCDRAFSRA VEGFDLSDER PALATLRLAA SHYLHQCGEP GSMQRVLEIL YMKCEQSEEN 
APLMRRRALY ELQTLRIAKA LLRRAVAAGE LDASLDVHLA GVYLLSLLEG IFGSMIWTTR 
LRGDRWRDAE AMLDAGVDTL RASPALRVAE ACAARGLPRA NVH