Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BURPS668_1886 |
Symbol | |
ID | 4885433 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia pseudomallei 668 |
Kingdom | Bacteria |
Replicon accession | NC_009074 |
Strand | + |
Start bp | 1846627 |
End bp | 1847370 |
Gene Length | 744 bp |
Protein Length | 247 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 640127814 |
Product | His/Glu/Gln/Arg/opine amino acid ABC transporter permease |
Protein accession | YP_001058921 |
Protein GI | 126440194 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0765] ABC-type amino acid transport system, permease component |
TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.115438 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGATCTGT CGATACTCGC GAACAATCTG CCGTACCTGC TCGTCGGCGC GTTTCCGGAC GGCCCGCTCG GCGGCGCCGC GCTGTCGCTC GTGCTCGCGC TCGCATCGGC GCTGGCGTCG GCCGGGCTGG GCGTCGCGCT CGGCGTCGCG CTCGCGCTCG CGACGGGGGC GCTGCGCGGC GCGCTCGTCG TCGTGATCGG TTTTTTTCGT GCGATTCCGG TGCTGATGCT GATCTTCTGG ACGTACTTCC TGCTGCCGGT GCTGCTGCAC GCGGACGTGC CGGGGCTCGC GGCCGTCGTG TGCGCGCTGT CGCTCGTCGG CGGCGCGTAT CTCGCGCATT CGGTGCACGC GGGCATCCGG GCTGCGGGCG ACGGGCAATG GCAGGCCGGG CTGTCGCTCG GGCTCACGCG CTGGCAGACG GTGCGCCACG TGCTGCTGCC GCAGGCGGTC AGGATCATGA CGCCGTCGTT CGTCAATCAG TGGGTGTCGC TCGTGAAGGA CACGTCGCTC GCGTACATCG TCGGCGTGCC GGAGCTGTCG TTCGTCGCGA CCCAGGTCAA CAATCGGCTG ATGGTGTATC CCGCGCAGAT CTTCCTGTTC GTCGGCGTGA TCTACCTGAT TCTCTGCACC GCGCTCGACG TCGCGGCGAC GCGGCTGCTC GCGCATCGGC GGCGGCGCGC GCCGCGCGGC GACGATGCGA CGCGCGCGAG CGCCGCGCAG CCGGCGGCGG GCGGGCCGCG ATAG
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Protein sequence | MDLSILANNL PYLLVGAFPD GPLGGAALSL VLALASALAS AGLGVALGVA LALATGALRG ALVVVIGFFR AIPVLMLIFW TYFLLPVLLH ADVPGLAAVV CALSLVGGAY LAHSVHAGIR AAGDGQWQAG LSLGLTRWQT VRHVLLPQAV RIMTPSFVNQ WVSLVKDTSL AYIVGVPELS FVATQVNNRL MVYPAQIFLF VGVIYLILCT ALDVAATRLL AHRRRRAPRG DDATRASAAQ PAAGGPR
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