Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BURPS668_1878 |
Symbol | |
ID | 4883530 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia pseudomallei 668 |
Kingdom | Bacteria |
Replicon accession | NC_009074 |
Strand | + |
Start bp | 1840967 |
End bp | 1841911 |
Gene Length | 945 bp |
Protein Length | 314 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 640127806 |
Product | type II secretion system protein |
Protein accession | YP_001058913 |
Protein GI | 126440858 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG2064] Flp pilus assembly protein TadC |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.650462 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACGCCGG CCGCGCTGTC GATCACCGTG CTGCTCGCGC TCGTCGCCGT CGCGGCGCTG GCGTGGCTGC TCACCCGCGA CGTCGCGGTG CGCCGGCGCG TCGCGCAGCG CGCGCGCGCG AGCGCCGCGC GCGCGGCGGC CGTCTACGCG CCGGTGGACG ACGGCGCGCG CAGCATGCCG CGGCGCGTCG CGCAGCGCGT GGCGTCGCTC GGCGAGCGGG TGCCCGTCGT CGACGCGACG CAGCGGATGA AGCTTGCCGC GCGGCTCGCG AGCGCGGGCT TTCGCGAGCA TCGCGCGGTG TCGGTGATGG CGGGGCTCAA GCTCGTCGTC GGCGCGTGCG CGGGGCTCGC CGCGCTCGCG CTCGGCGCGC ACGTGCCGCG CGTGGGCGAC TACGTGGTGC TGCGCGTGCT GATGATGGCG GGCGCGTTCG TGATCGGCAT GATGCTGCCC GAGCATGCGC TCGGCTTCGT GCTCGCGCGG CGCCAGAAGA CGATCGCCGC GTACCTGCCC GACGCGCTCG ACCTGCTCGT CATCTGCACG AACGCGGGCA ACAGCCTCGC GGTCGCGATC CGGCGCGTCG CGTCCGAGCT GAAGACGATC TGCCCGCCGC TCGCCGACGA ATTCTCCGTG TGCGCGGACG AACTGCAGAT CGGCGGCGAC GCCGCGTTCG CGCTCAACGC GATGGCCGCG CGCATCGGCC TGCCGTCGAT GCGCGCGCTC GTGACGACGC TCGTCCAGTC GCAGCAATAC GGCACGCCGA TCACGCAGTC GCTGCGGATG CTCTCGCGCA CCGAGCGCGC GATGCAGATG ATCGCGCTCG AGGAAAAGGC GGCGAAGCTC GCGCCGAAGA TGACGCTGCC GATGATGCTG TTCGTGATGC CGACCGTCGC GTTGATCGCG GCGGGGCCGG CGGTGATTCG ACTGATAGCG GTGTTCCACA AATGA
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Protein sequence | MTPAALSITV LLALVAVAAL AWLLTRDVAV RRRVAQRARA SAARAAAVYA PVDDGARSMP RRVAQRVASL GERVPVVDAT QRMKLAARLA SAGFREHRAV SVMAGLKLVV GACAGLAALA LGAHVPRVGD YVVLRVLMMA GAFVIGMMLP EHALGFVLAR RQKTIAAYLP DALDLLVICT NAGNSLAVAI RRVASELKTI CPPLADEFSV CADELQIGGD AAFALNAMAA RIGLPSMRAL VTTLVQSQQY GTPITQSLRM LSRTERAMQM IALEEKAAKL APKMTLPMML FVMPTVALIA AGPAVIRLIA VFHK
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