Gene BURPS668_1871 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBURPS668_1871 
Symbol 
ID4884366 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia pseudomallei 668 
KingdomBacteria 
Replicon accessionNC_009074 
Strand
Start bp1833648 
End bp1834166 
Gene Length519 bp 
Protein Length172 aa 
Translation table11 
GC content77% 
IMG OID640127799 
Productpeptidase A24A, prepilin type IV 
Protein accessionYP_001058906 
Protein GI126439772 
COG category[O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG4960] Flp pilus assembly protein, protease CpaA 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGCGCGCC GGCCGGACTT CCCGATTTCA CGCACGCCCA TGATTCTCCC GCTCAAGCTC 
GTCGCCAGTT GGACGCTCGC GTCGCTCGCG CTCGCCGATC TGCGCACGCG GCGGCTCGCG
ACCTTCGCGG TCGCGCTCGT CGGCGCGCTG TACGCCGCGC TGGCGCTCGC GGGCGCGCCG
GGCGACGGCG GCTTCGCGTC GCATGCGGCG CTCGGTGCGG CCGCGTTCGC GCTCGGCGCG
GCGATGTTCC GCGCCGGCTG GATCGCCGGC GGCGATGTCA AGCTCGCGGC CGTGGTGTTT
CTATGGGCAG GCCCCGCGCA TGCGTGGCCC GTCGCGTTCG CGATCGGCGT CGGCGGCTTG
GCCGTCGGCG CCGTCTGCAT CGCGGCCGGG CGTGCGCCGC GCGTGCTCGC GTGGTTCGCG
CCGGCGCGCG GCGTGCCGTA CGGGGTCGCG CTCGCGGCGG GCGGCCTGCT CGCCGTATGG
GCGCCGGCGG CTTGCCGGCT GCCCGGATGT CTCGGATGA
 
Protein sequence
MARRPDFPIS RTPMILPLKL VASWTLASLA LADLRTRRLA TFAVALVGAL YAALALAGAP 
GDGGFASHAA LGAAAFALGA AMFRAGWIAG GDVKLAAVVF LWAGPAHAWP VAFAIGVGGL
AVGAVCIAAG RAPRVLAWFA PARGVPYGVA LAAGGLLAVW APAACRLPGC LG