| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS668_1767 |
|---|
| Symbol | |
|---|
| ID | 4885628 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia pseudomallei 668 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009074 |
|---|
| Strand | + |
|---|
| Start bp | 1743043 |
|---|
| End bp | 1743942 |
|---|
| Gene Length | 900 bp |
|---|
| Protein Length | 299 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 75% |
|---|
| IMG OID | 640127695 |
|---|
| Product | putative pilus assembly protein CpaB |
|---|
| Protein accession | YP_001058806 |
|---|
| Protein GI | 126439530 |
|---|
| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG3745] Flp pilus assembly protein CpaB |
|---|
| TIGRFAM ID | [TIGR03177] Flp pilus assembly protein CpaB |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 0.726426 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCCAATC ATCTGACCAA GATCATCGCG GGGCTGCTGA TCGGGATCGC GATCCTGCTC
GGCATTTACG CATGGCTGCT CGGGCGCAAG CCGGCGCCTG TCGCGCCGGG CGCCGCGCCC
GCCGTGGCGA CGGCGATGGT GCCCGTCGTC GTCGCGGCGC GCGCGCTGCC CGCCGGGCAG
CCGATTCCCG CCGATGCGCT GAAGGTGCAG CAGGCGCCGA CGCCGATCGC CGGCGCCTTC
CCGAATCCGA TGCTCGTGAC GGGCCGCATC CCGGCGAGCG ACATCGGCGC GCAGGCGCCG
GTGCTCGAGA GCGAGCTGAT GTCGGGCCTC GCCGACCAGA TCGCGCCCGG CGAGCGTGCC
GTCGCGATCA AGGTCGACGA TACGAACGCG GTCGGCAATC GGCTGCGTCC CGGCAATTTC
GTCGACGTGT TCGTGAACCT GAAGCGCGAA GGCGGCTTCG GGGCGACCGG CTCCGAGATC
GCGCAGACCC AGGCGCGGCT GCTGCTGTCG CGGGTGCGCG TGCTGTCGTT CGGCGATGCG
ACGGTGGACC GCGACGGCAC GCCGGGCCCG ACGGGCGCGG GCGCGCGCAC CGCGGTGCTC
GCCGTGCCGA CCGCGCAGGT CGACGCGCTC ACGCTCGCCG AGGCGAGCGG GCGGCTCGTG
CTCGCGCTGC GCAGCCCGCG CGACGAAGAC ATCGCCGCGC AGACGGTGGC GATCCGCGCG
CCGGCCGGCG CCGGGCCGTC GAATCAGGCG GCGACGGGGC TCGTGCTGAG CGAACTGTCG
GGCAGCGGGG CGCCCGCGCA GGCGCCGCGC GCGGCTCCGA CGCGAGTGAC GGCCGCGCCG
CATGCGGCGG GCAGCATCGA AGTGATCCGG GGAGGGCGGG CCGAGACGCT CGCCTATTGA
|
|---|
| Protein sequence | MANHLTKIIA GLLIGIAILL GIYAWLLGRK PAPVAPGAAP AVATAMVPVV VAARALPAGQ
PIPADALKVQ QAPTPIAGAF PNPMLVTGRI PASDIGAQAP VLESELMSGL ADQIAPGERA
VAIKVDDTNA VGNRLRPGNF VDVFVNLKRE GGFGATGSEI AQTQARLLLS RVRVLSFGDA
TVDRDGTPGP TGAGARTAVL AVPTAQVDAL TLAEASGRLV LALRSPRDED IAAQTVAIRA
PAGAGPSNQA ATGLVLSELS GSGAPAQAPR AAPTRVTAAP HAAGSIEVIR GGRAETLAY
|
|---|
| |