Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BURPS668_1736 |
Symbol | scpB |
ID | 4885670 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia pseudomallei 668 |
Kingdom | Bacteria |
Replicon accession | NC_009074 |
Strand | + |
Start bp | 1708696 |
End bp | 1710063 |
Gene Length | 1368 bp |
Protein Length | 455 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 640127664 |
Product | segregation and condensation protein B |
Protein accession | YP_001058775 |
Protein GI | 126441833 |
COG category | [K] Transcription |
COG ID | [COG1386] Predicted transcriptional regulator containing the HTH domain |
TIGRFAM ID | [TIGR00281] segregation and condensation protein B |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.0336275 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATACCC AAGAGGCGAA GATCGTCCTC GAGACTGCCT TGATCTGCGC GCAGGAACCG CTGAAGCTCG GCGATTTGCG CAAGCTCTTT GCCGACGGCG TGTCGGCGGA TACAGTCCGA ACACTGCTCG AAGATCTGAA ACAGGAATGG ACCGGACGGG GGGTCGAACT CGTCGCGCTC GCGTCGGGCT GGCGCTTCCA GAGCAAGCCG GCGATGCGCA CGTATCTCGA TCGCCTGCAT CCCGAGAAGC CGCCGAAGTA TTCGCGCGCC GTGCTGGAGA CGCTCGCGAT CATCGCGTAC CGGCAGCCGG TCACGCGCGG CGACATCGAG GAGATCCGCG GCGTCACGGT GAACACGCAG GTCGTCAAGC AGCTCGAGGA CCGCGGCTGG ATCGAAGTGA TCGGTCATCG CGACGTGCCG GGCCGTCCGG CGCTCTACGC GACGACAAAA CAGTTTCTCG ACGACCTCGG CCTGAAGGCG CTCGACGATC TGCCCGCGCT CGAGGAGCCG GCCGCGCATC TGGAGGCGAG CCTGCTCGCG CAGCAGGCGA TCGATTTCCC CGATGACGCG CGCGGCGACG GCGAAGCGCC TGCCGTCGCG CCCGAGACGG ACGCCGCCGC CGCGCAGGCG GGCGAGGTTG CCGAGCCGGC GAGCGATTCG GTGGTTTTGC GCAACGAAGA TACGGCGCGC GCCGCCGAGC CGCGGCAGGC GGACGCGGCG CCGACGCGTG CCGACGAGCC GCGGCAGGAA GGGGCGACGG ACGGCTTGGC GGCACGGATC GGCGATCCAG CCGATAATGA CGCCGGGCGA GCCGATGTGG ACGTCGACGC GGCGCCGGCT CTCGGCGAAG CCGATGCGCC GCGCGGCGGC GATGCTTCCG GGCATGCGGC TCGCGAGATC GACTCGCGCG AGATGACGGA GCCGGCAGAC GCCGGCGGCG AGGCGGCCGG CACGACCGCA TCGCATACGC ATGCGGTCGC GCCGTACCAT GATGCGCAGA GCGCAGCGGA CGCCGTCGCG GCGCCGCACG CCGGCGATGC AGCCGCTGAT GGCGAGCGCG CCGAATCGCC CTCGGGGACG AACGAAAACG CAAACTACGT CGCGCAGCCG GACGCGGAGC CGGCCGACGC GGCACACGCA GCAACACGCG AGGCGGCCGC CGACCCGGCG GCGGGCCGAG CGACGAAGGA AGACCACGGC GCGATCGGCG GCATCCCGCA CGATGCCGAG CCGGTCCGGG CGCACGCGGA GGAGGCGTTG GACGACACGT CCGACAGTCT CGCCGACGCC GTGCGCAGTG CAAGCGAGGC GGCCCCCGAG CACGAGCGGC AGGACGACGA GGACGCGCCT GCGAAGCGTC GCGCCTGA
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Protein sequence | MNTQEAKIVL ETALICAQEP LKLGDLRKLF ADGVSADTVR TLLEDLKQEW TGRGVELVAL ASGWRFQSKP AMRTYLDRLH PEKPPKYSRA VLETLAIIAY RQPVTRGDIE EIRGVTVNTQ VVKQLEDRGW IEVIGHRDVP GRPALYATTK QFLDDLGLKA LDDLPALEEP AAHLEASLLA QQAIDFPDDA RGDGEAPAVA PETDAAAAQA GEVAEPASDS VVLRNEDTAR AAEPRQADAA PTRADEPRQE GATDGLAARI GDPADNDAGR ADVDVDAAPA LGEADAPRGG DASGHAAREI DSREMTEPAD AGGEAAGTTA SHTHAVAPYH DAQSAADAVA APHAGDAAAD GERAESPSGT NENANYVAQP DAEPADAAHA ATREAAADPA AGRATKEDHG AIGGIPHDAE PVRAHAEEAL DDTSDSLADA VRSASEAAPE HERQDDEDAP AKRRA
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