| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS668_1658 |
|---|
| Symbol | |
|---|
| ID | 4884795 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia pseudomallei 668 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009074 |
|---|
| Strand | - |
|---|
| Start bp | 1626966 |
|---|
| End bp | 1628015 |
|---|
| Gene Length | 1050 bp |
|---|
| Protein Length | 349 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 640127586 |
|---|
| Product | carbohydrate ABC transporter periplasmic sugar-binding protein |
|---|
| Protein accession | YP_001058699 |
|---|
| Protein GI | 126441428 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1879] ABC-type sugar transport system, periplasmic component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 0.952286 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGACTTT GCACTGGCAA GGCCGTCCTG CGCGCATGCG TCGCCGCGAT CGCCGTCGCG
GCGGGCGTGG GCGGCGCGGC CCCGGCAGCC CAGGCGGCGG GCGCGCGCTT CGCGCTCGTG
AGCCACGCGC CCGATTCCGA TTCGTGGTGG AACACGATCA AGAACGCGAT CAAGCAGGCG
GACGAGGATT TCGATGTCAC GACCGATTAC CGCAATCCGC CGAACGGCGA CATCGCCGAC
ATGGCGCGCC TGATCGAGCA ATCGGCCGCG CGCGACTACG ACGGCGTGAT CACGACGATC
GCCGATTACG ACGTGCTGAA GAATTCGCTG AAGAAAGTCA CCGCGAAGAA GATCCCGCTC
GTGACGATCA ACTCCGGCAC CGAAGAACAG AGCGCGCAAC TGGGCGCGAT CATGCATGTC
GGCCAGCCCG AGTACGTCGC GGGTCACGCG GCGGGCGAGA AGGCGAAGGC GGCCGGCGTG
AAGCGCTTCC TCTGCGTGAA CCACATCGCG ACCAACAGCG TGTCGTTCGA CCGCTGTCGC
GGCTTCGCCG ACGCGATCGG CGCCGACTAC AAGAGCTCGA CGATCGACTC CGGCCAGGAC
CCGACCGAGA TCCAGTCGAA GGTGAGCGCG TACCTGCGCA ACCATCCGAA CACGCAGGCG
ATCCTCACGC TCGGCCCGGT GCCCGCCGCG GCGTCGCTGA AGGCGGTGCA GCAGATGGGC
CTCGCGAACA AGCTGTTCTT CGCGACGTTC GATTTCTCCG ACGACATCGC GAAGGCGATC
CAGAGCGGCG CGATCAAGTT CGCGATCGAC CAGCAGCCGT ACCTGCAGGG CTACATCCCG
GTGGCCGTGC TCGCGATCGC GAAGCAGAAC AAGACCACCG ATCCCGCGAA GATCCGCCAG
ATCCTCGAGG CGAACCCGAA ATTCCAGGCG CGGCTGTCGA CCTACGGGCT GCAGCCGTCG
TACGGGCCGA AGAACATCCG CTCGGGCCCG GGCTTCATCA CGAAGGAGAA CCTCGAGAAG
GTGATCAAGT ACGCGGGCCA GTACCGCTAA
|
|---|
| Protein sequence | MRLCTGKAVL RACVAAIAVA AGVGGAAPAA QAAGARFALV SHAPDSDSWW NTIKNAIKQA
DEDFDVTTDY RNPPNGDIAD MARLIEQSAA RDYDGVITTI ADYDVLKNSL KKVTAKKIPL
VTINSGTEEQ SAQLGAIMHV GQPEYVAGHA AGEKAKAAGV KRFLCVNHIA TNSVSFDRCR
GFADAIGADY KSSTIDSGQD PTEIQSKVSA YLRNHPNTQA ILTLGPVPAA ASLKAVQQMG
LANKLFFATF DFSDDIAKAI QSGAIKFAID QQPYLQGYIP VAVLAIAKQN KTTDPAKIRQ
ILEANPKFQA RLSTYGLQPS YGPKNIRSGP GFITKENLEK VIKYAGQYR
|
|---|
| |