Gene BURPS668_1622 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBURPS668_1622 
Symbol 
ID4884399 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia pseudomallei 668 
KingdomBacteria 
Replicon accessionNC_009074 
Strand
Start bp1585927 
End bp1587546 
Gene Length1620 bp 
Protein Length539 aa 
Translation table11 
GC content67% 
IMG OID640127550 
ProductEmrB/QacA family drug resistance transporter 
Protein accessionYP_001058663 
Protein GI126439190 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID[TIGR00711] drug resistance transporter, EmrB/QacA subfamily 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACGGAT CGACGCCCAC CCCGCCCGCC GCACCGCGCC GCGACCGCAA CGGCAACGGC 
GACGGCACGT GGCGTCCCGC CGCGAACCCG TGGCTGATCG CGGTCGTCGT CACGCTCGCC
GCGTTCATGG AGGTGCTCGA CACGACGATC GTCAACGTCG CGCTGCCGCA CATCGCCGGC
ACGATGTCGG CGAGCTACGA CGAAGCGACC TGGACGCTCA CGTCGTATCT CGTCGCCAAC
GGCATCGTGC TGCCGATCTC CGGCTTTCTC GGGCGCCTGC TCGGCCGCAA GCGCTACTTC
GTGCTGTGCA TCGTCGCGTT CACGATCTGC TCGTTCCTGT GCGGAATCGC AACCGATCTC
GGCCAGCTGA TCGTGTTCCG CGTGCTGCAG GGGCTGTTCG GCGGCGGCCT GCAGCCGAAC
CAGCAATCGA TCATCCTCGA TACGTTCCCG CCCGAGCAGC GCAACCGCGC GTTCTCGATC
TCGGCCGTGG CGATCGTCGT CGCGCCGGTG CTCGGGCCGA CGCTCGGCGG CTGGATCACC
GACAACTTCT CGTGGCGCTG GGTGTTCCTG CTCAACGTGC CGATCGGCGT GCTGACTTCG
CTCGCGGTGA TCCAGCTCGT CGAGGATCCG CCGTGGAAAC GCGGCCGCGC GCGCGGCCTG
TCGATCGACT ACATCGGCAT CACGCTGATC GCGATCGGCC TCGGCTGTCT GCAGGTGATG
CTCGATCGCG GCGAGGACGA GGACTGGTTC GCGTCGACGT TCATCCGCAC GTTCGCGGTG
CTGACCGTCG CGGGGCTCGT CGGCGCGACG TTCTGGCTGC TCTACGCGAA AAAGCCCGTC
GTCGATCTGT CGTGCCTGAA GGATCGCAAT TTCGCGCTCG GCTGCGTGAC GATCGCGACG
TTCGCGGTCG TGCTGTACGG CAGCGCCGTG CTCGTGCCGC AACTCGCGCA GCAGCGGCTC
GGCTACACGG CGATGCTCGC GGGTCTCGTG CTGTCGCCGG GCGCGCTCCT CATCACGCTC
GAGATTCCGA TCGTCAGCAA GCTGATGCCG TACGTGCAGA CGCGCTTTCT CGTATGCTTC
GGCTTCCTGC TGCTCGCCGC GTCGCTCGTG TACTCGCACA CGCTCGTGCC CGACATCGAC
TATCCGAACC TCCTGAAGAT ACGCAGCGCG CAATCGCTCG CGATCGGCTT CCTGTTCGTG
CCGATCACGA CGCTCGCGTA TCTGACCGTG CCGCGCCGGC TGAACGACGA TGCGTCCGCG
CTTTTCACGA TGTTCCGCAA TGTCGCGGGA TCGATCGGCA TTTCGCTGTC GACCGCGCTG
ATTCGCGAAC GCGCGCAGGC GCGCATGGCG CATCTGTCGA CGCACTTGTC GCCGCTGTCG
CAGAACTTCG ACGATACGCT GCGGCAGAAC GCGCAGACGA TCGCGTCGCT CTCGGGGATG
CCGCCGCCCG CCGCGCTGCA AACGGCGAGC GGGCAGTTGT ACGAGACCTT CGTGTCGCAG
GCGACGATCC TCGCGTACCT CGACGTGTTC GCGATGCTCG CGATCTTCTG CTTCGTGTGC
ACGCCCCTCA CGCTGCTTTT CTCGCCCGTG AAGGCGGCGG GCGGCCCGGG AGGACACTGA
 
Protein sequence
MNGSTPTPPA APRRDRNGNG DGTWRPAANP WLIAVVVTLA AFMEVLDTTI VNVALPHIAG 
TMSASYDEAT WTLTSYLVAN GIVLPISGFL GRLLGRKRYF VLCIVAFTIC SFLCGIATDL
GQLIVFRVLQ GLFGGGLQPN QQSIILDTFP PEQRNRAFSI SAVAIVVAPV LGPTLGGWIT
DNFSWRWVFL LNVPIGVLTS LAVIQLVEDP PWKRGRARGL SIDYIGITLI AIGLGCLQVM
LDRGEDEDWF ASTFIRTFAV LTVAGLVGAT FWLLYAKKPV VDLSCLKDRN FALGCVTIAT
FAVVLYGSAV LVPQLAQQRL GYTAMLAGLV LSPGALLITL EIPIVSKLMP YVQTRFLVCF
GFLLLAASLV YSHTLVPDID YPNLLKIRSA QSLAIGFLFV PITTLAYLTV PRRLNDDASA
LFTMFRNVAG SIGISLSTAL IRERAQARMA HLSTHLSPLS QNFDDTLRQN AQTIASLSGM
PPPAALQTAS GQLYETFVSQ ATILAYLDVF AMLAIFCFVC TPLTLLFSPV KAAGGPGGH