| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS668_1621 |
|---|
| Symbol | |
|---|
| ID | 4885584 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia pseudomallei 668 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009074 |
|---|
| Strand | + |
|---|
| Start bp | 1583222 |
|---|
| End bp | 1584256 |
|---|
| Gene Length | 1035 bp |
|---|
| Protein Length | 344 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 640127548 |
|---|
| Product | trans-aconitate methyltransferase |
|---|
| Protein accession | YP_001058661 |
|---|
| Protein GI | 126439737 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG4106] Trans-aconitate methyltransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 0.898496 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGGAATAT CTGCGGCAAT ATATTTATTT GACGAGATAC AGACCAATTC CTATTTTATG
ACTGGCGTGG ATATCGATAT ATCGATATTT CGCGCGACAA GAAACGGGGC ATCGGTCGAT
CACGACCGTT TGCAACGCGT GCTTCGCCGC CTTGGCGGGG GCCGACGCGG GACGCGCGCG
AGGAGAGACC TCATGGATGC TACGATCGGC CGCTACGTGC CGCACGATAG CTGCCTGGCG
AATCGAAGCT GGGACCCCGA GCGCTATCTG CAGTTCTCCG GCCTGCGCCT GCGGCCCGCC
GTCGAACTGC TGCAACGCGT GCCGCTCGTC GCGCCGGGGG TCGTCTACGA CCTCGGCTGC
GGCACCGGGC ACGGCACCGT CGCGCTCGGC GAGCGCTGGC CGGGCGCGCG GGTGACGGGT
GTCGACAGTT CACCCGAAAT GCTCGACAGC GCACGCTCGC TCGGGCGCGA TATCGCATGG
CGCGAAGCCG ATATCCGGAG CTGGACGCCC GACGAGCCGG CCGACCTCAT CTTCGCGAGC
GCCGTGCTGC ATTTCCTCGG CGATCACGAC ATCCTGATGC CGCGGCTGAT GCGGCATCTT
CGGCCGGGCG GCTGCCTCGC GCTGCACATG CCGGACTGGT GGGGCACGCC CTGGTATCGG
CTGATGCACG AAGTGCTCGC GACGGGCGGC CCGGGCGGCG GCGCGCTCGG CACGCCCGCG
CTGCGCGCGG AGCTCGCGAA GAACCGCGTC GAGAGCCCGC AGTTCTACTA TTCGCTGCTC
GCGCCGCACA CCGCGTATCT CGACATCTGG CAGACCGATT ATCTGCAGAT CGTCGAGGGT
GACCACCCGG TGTTCGACTG GATCAGGGTG TCGGGCCTGC GGATCGTCAC CGACGGCCTT
GCCGCCGACG AGCGCGACCG CTTTCTCGAT CGATACGTGC CGCGCCTGCA TGCGCTCTAT
CCGCGCGGAG ACGACGGCCG CACGCTGTTT CCGTTCAAGC GGCTGTTCAT CGTCGCGCAG
GCGCCGTTGC GCTGA
|
|---|
| Protein sequence | MGISAAIYLF DEIQTNSYFM TGVDIDISIF RATRNGASVD HDRLQRVLRR LGGGRRGTRA
RRDLMDATIG RYVPHDSCLA NRSWDPERYL QFSGLRLRPA VELLQRVPLV APGVVYDLGC
GTGHGTVALG ERWPGARVTG VDSSPEMLDS ARSLGRDIAW READIRSWTP DEPADLIFAS
AVLHFLGDHD ILMPRLMRHL RPGGCLALHM PDWWGTPWYR LMHEVLATGG PGGGALGTPA
LRAELAKNRV ESPQFYYSLL APHTAYLDIW QTDYLQIVEG DHPVFDWIRV SGLRIVTDGL
AADERDRFLD RYVPRLHALY PRGDDGRTLF PFKRLFIVAQ APLR
|
|---|
| |