| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS668_1585 |
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| Symbol | |
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| ID | 4882360 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia pseudomallei 668 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009074 |
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| Strand | + |
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| Start bp | 1551963 |
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| End bp | 1555298 |
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| Gene Length | 3336 bp |
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| Protein Length | 1111 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640127513 |
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| Product | Rhs element Vgr protein |
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| Protein accession | YP_001058626 |
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| Protein GI | 126438749 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3501] Uncharacterized protein conserved in bacteria
[COG4253] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR01646] Rhs element Vgr protein
[TIGR03361] type VI secretion system Vgr family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.163096 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATTTAG TCGCCGCATT GACGGGCTAT TCTCAAACGA CTCGCCACAT CCGGATCGAC
ACGGCGATGC CGGGCGCGTT CGTGGTCGAA CGTTTTCATG GGCGCGAGGG CGTCAACGAA
TCGTTTCGCT TCGAGATCGA CGTGCTGTCG AGCGAGCCGT TTCTCGATCT GACGCCGCTC
ATCGGCCACG CGGCGCGGCT GCGTCTCGCG ACGAGCGCGG GCGAGCGCAG CTGGAACGGC
TATGTGACGC ATGCGGCGTA TGCGGACAGC GACGGCGAGA TCACCCGCTA TCGCCTCACG
ATGGAGTCGT GGTTCGCGCT GTTGCGCCTG CGTCGCAATT GCCTGTACTT CGTCGACGTC
GACACGAAGG ACATCTGCGA GCGTGTGTTC GGCGATTATC CGCAAGCGCG TCGGCGCTAC
GAACTGAAGG AACCGCTGCG CAAGTTCAGC CTGCGCGGCC AGTACCGGGA GACCGACGAC
ACGTTCGTGC TGCGCCAGCT CGCCGAAGCC GGCCTGTCGT TCAGGATCGA GCATGCGCAG
GATGCGGGCA AGGAAGCGTC GGGCGACCAT ACGGTCGTCG TGTTCGATCG GCGCGCGCCA
TTTCGGCACG GCAGCACGAT CGCATACAAC CTGCAGGACG TCGGCGATCC GGACGGCGTG
ATCACGCAGT TTTCCGAACG CCATCAGATG GTGCCGGACC GGGTCGTCGC GACGAGCTGG
AAAGCCGACG AATTGCTCGC GCTCGCCGGG CACGCGCAGC AGCCGCCCGA GGACAAGGCG
CCGGTGCTGC CCGTGCGCGA AATCTACGAC GGCCAACGCG CGGGCCGCTT CGACACGATC
GACGACGCGC AGCGCTTCGC CGAGCAGCGG CTCGACGCGC TGCGCCTGCC GAAGCGGATC
CATTACGGCG CGGGCTCGTC GCGCACGCTC GAGATCGGCG CGGTCCATAC GCTCGCCGGT
TATCTGGACC GTGCGATCAC GTTCGTGCCG CTGTCGATCG AGCACGAGGC GGTCAACAAT
CTCGGCGCCG ACATCGGCGC GCTGCTCGGG CGCGGCGAGC TCGACAAGGG GCTGTACCGC
AACCGTTTCG TCGCGGTGCC CGACGGCACG CCGATCGTGC CGCCGCATCG CGATCGGCCG
ATCGTGCACG GCGTGCAGAC CGCGATCGTC GTCGGCGAGG CCGGCAGCCG CGTCAGCAGC
ACGCGCGATC ATCAGGTGCG CGTGCAGTTT CCGTGGATGC GCGGCACGGC GCCGCTGCCC
GGCGGCCTGA CCGACACGGC GAGCCGCTCG AATCCGGCCG GGCACGCGCC GGACGATCAT
CGCTCGGGCG TGCTCGCGCG CGTCGCGGAA TCATCGGCCG GGCCGAACTT CGGGCATGCG
TTCACGCCGC GCGTCGGCGC CGAAGTGGTG ATCGGCTTCG AGTCGGGCAA CATCGACATG
CCCGTCGTGC TCGGCCAGGT CTACGGCGGG CGCGTGCAGC CGCCGTTCGC GGCGGGCGAA
GGCAGCGACG CCAACCATCC GGGCACGCTG ACCGGCCTGC AGACGCAAAC GCTCGATGGC
CAGTCCGGCA GCCGCTGGGT GATGGACGAC GCCGCGGGAC AACTGCGGCA CGAGCTGAGC
AACTCGACCG CGAACAGCCG GCTCGCGCAG GGTTACCTGA TCGATCAGCA GGGCGCGATG
CGCGGCGCGT ATCGCGGCGA AGGCTTCGAG CTCGCGACCG ACGGATGGGG CGTCGTGCGC
GCGGGCGAAG GCGTGCTCGT ATCGAGCACG GCGCGGCGGC TCGCGACGTC GACGCAGATG
GACGTCGCGC AAAGCGTCGG ACAACTGAAG CAGGCGGTGC GGACCGCGCA GGGCATGAGC
GAATCCGCCG CCGCGGCGCA CGCGGGCGGG TTGGCCGCCA ATGCCGCGCA GGCGGATTTC
CTGAAGGCGA TCGATCCGGC GCAGGACGGC AAGTACACGG GCGCGGTCAA CGGGCAGAGC
GCGACGAAGG CGAGCGGCGC GCAGCGCGAC GGCGGGGAGC CGGTCGAGCG CTTCGCCGCG
CCGGCGGTGC TGATGGAGTC GCCGGAGAAC ATCGTGCTGA CGACGCCGCA CAGCGCCGTC
TCGTATGCGG CGCAGCACGT GCATTTGACC GCGCAGCGCG ACGCGCACGT AGCGGCCGCC
GCGACGGTCG CGGCCGCGTC GGGCGATGCC GTGAGCCTGT ATGCCGCCGC GGGCGGCCTC
CGGGCGATCG CGAGCGACGG GCCGGTGAGC GTCGAGGCGC ATACGTCGAC GATGGAGATT
CTCGCGGATC AGTCGGTGCG CATCACGTCG ACCGACGATC GCATCGACGT GCTCGCGAAG
GACGCGATCG TGCTGCAGCA GGGGCCGAAC CGGATCACGC TGAAGGGCGG CGACATCACG
GTCGAGACGC CGGGGCAGTT CCTCGTGAAG TCGGGCGCGC ATCCGTTTCC GGGGCCGGCC
GCGCAGAGCG TTTCACTGCC GCCGCTGCCG ATTCCCGCGC CGCTCGCGCT GTTCGACGAA
CAGATTCGCT TCGTCAACGA AGACGGCGAG CCGCTCGGCA ACGTCGCGTA CCAGCTGAAG
CTCGCCGATG GCTCGACCGT GTCGGGCGTG ACCGACGACA ACGGCAGAAC CGAGCGCGTA
TCGACGGACG GGCCGACGGC GATCCAGTCG GCGACGCTCA CGCCGACGCA GGTCGTCGAC
TGCTGCGGGC GAACCTCGGA TGTGCCGCCG CCGGCGGTGA AGGTCGACAT CAAGGGCGTC
GGCACCCACG ACACGCTGGT GGGCAGCTCG GAGCAATCGG TCACGGTCAA GGGCGAGAGC
CGGCCGCTGA CCGACGGCGA GATCGAGATG GCGAAAACCG TGTTTCAGGA CAGCATCGAT
TACAGCGCGG TGCGCGTGCA CAAGGGCAGC TATTTCTGGT TCAACTTGCA GAGCAAGCGT
ACGGCCGTGA CGCCGAACAA CACGATGTAT TTCCGCGAAG AGGATTTCGT GGAGGATTTT
TCGGTTGTCA GCGAGGAGTA TCCAAGGCGG GGTTGGTTCA TGCACGAAAT GACGCACGTT
TGGCAACATC AACGAGGATA TGCCGTGCGC TGGCATGCGC TTACCGTGAC GATTCGCGGC
GAGAGCGCGT ATCGGTACGA AATCGAGCCC GGGCAAGTCT TCAGCGATTT CAATATGGAG
CAGCAAGGCA ATCTTGTATC AGACTACTTT GCGCTCATTG TCGTGGACAA TCGAGGTGAG
TTGATTCATG CGCAACCAGG AAGCAAGAAT CAACTTCGCC AAGTGCTGGC CCCACTTCTA
CAGGATCCCA AGGATGCATC GAATCTTCCG AAATAG
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| Protein sequence | MDLVAALTGY SQTTRHIRID TAMPGAFVVE RFHGREGVNE SFRFEIDVLS SEPFLDLTPL
IGHAARLRLA TSAGERSWNG YVTHAAYADS DGEITRYRLT MESWFALLRL RRNCLYFVDV
DTKDICERVF GDYPQARRRY ELKEPLRKFS LRGQYRETDD TFVLRQLAEA GLSFRIEHAQ
DAGKEASGDH TVVVFDRRAP FRHGSTIAYN LQDVGDPDGV ITQFSERHQM VPDRVVATSW
KADELLALAG HAQQPPEDKA PVLPVREIYD GQRAGRFDTI DDAQRFAEQR LDALRLPKRI
HYGAGSSRTL EIGAVHTLAG YLDRAITFVP LSIEHEAVNN LGADIGALLG RGELDKGLYR
NRFVAVPDGT PIVPPHRDRP IVHGVQTAIV VGEAGSRVSS TRDHQVRVQF PWMRGTAPLP
GGLTDTASRS NPAGHAPDDH RSGVLARVAE SSAGPNFGHA FTPRVGAEVV IGFESGNIDM
PVVLGQVYGG RVQPPFAAGE GSDANHPGTL TGLQTQTLDG QSGSRWVMDD AAGQLRHELS
NSTANSRLAQ GYLIDQQGAM RGAYRGEGFE LATDGWGVVR AGEGVLVSST ARRLATSTQM
DVAQSVGQLK QAVRTAQGMS ESAAAAHAGG LAANAAQADF LKAIDPAQDG KYTGAVNGQS
ATKASGAQRD GGEPVERFAA PAVLMESPEN IVLTTPHSAV SYAAQHVHLT AQRDAHVAAA
ATVAAASGDA VSLYAAAGGL RAIASDGPVS VEAHTSTMEI LADQSVRITS TDDRIDVLAK
DAIVLQQGPN RITLKGGDIT VETPGQFLVK SGAHPFPGPA AQSVSLPPLP IPAPLALFDE
QIRFVNEDGE PLGNVAYQLK LADGSTVSGV TDDNGRTERV STDGPTAIQS ATLTPTQVVD
CCGRTSDVPP PAVKVDIKGV GTHDTLVGSS EQSVTVKGES RPLTDGEIEM AKTVFQDSID
YSAVRVHKGS YFWFNLQSKR TAVTPNNTMY FREEDFVEDF SVVSEEYPRR GWFMHEMTHV
WQHQRGYAVR WHALTVTIRG ESAYRYEIEP GQVFSDFNME QQGNLVSDYF ALIVVDNRGE
LIHAQPGSKN QLRQVLAPLL QDPKDASNLP K
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