| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS668_1567 |
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| Symbol | |
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| ID | 4883252 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia pseudomallei 668 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009074 |
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| Strand | + |
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| Start bp | 1532328 |
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| End bp | 1533857 |
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| Gene Length | 1530 bp |
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| Protein Length | 509 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 640127495 |
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| Product | TPR repeat-containing protein |
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| Protein accession | YP_001058608 |
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| Protein GI | 126439247 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3063] Tfp pilus assembly protein PilF |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.085115 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACGGCGG AACTCGACGC CCGTGTGCGC GCGCTCACGC TGCGCGCGCA GCAACTGTTC
GACGACAGCC GCCCGGAGCA GGGCGCGCTG CTCGCCGCGC AGGCGCTCGC GCTCGCGCCG
GACGACGCGC TCGCGCTGAA GCTCGTCGGT GTCGCCGAGT GCATGCGCGG CGATCATGCG
GCGGGGCTCG TGTATCTCGA GCGGGCGTGC CTGTCGGCGC CCGGGGACGC GAATCTGCAC
TACAACGTGG CCGTCGCGCA CGAATGCACC GGCTCGCACG AGCGCGCGGC GTTGAGTTAC
CGCCACTGCC TGCGTCTGCA GCCCGATCAT GCTGACGCGC TGTGGAACTA CGGCGAATAC
CTGCGCCTGA ACGGCCATTT CGAGGCGGCC GCGCGCTGCT TCGAGGCGCT GCAGGCGCAG
GCGTGCCGCT ATCCGTCGAT GCATCACCGG ATGGCCGTCG TCTATACGCA TCTGCATCGC
TTCGACGACG CACGGCGGCA TTTCGCGCTC GCGATGGACG AGAACATCGA TACGCGCGTC
ACGCGCTGGG AGCGCGCGCA TTTGCGGCTC GGCACGCGCG ATTTCGCACG CGGCTGGCCG
GACTACGACA CGCGCTTCGA CATCGGACAT CTGATCAACG TCCACTGCCA TCCGTTTCCG
ATCCGGCTCT GGCAAGGCGA GCCGCTCGCG GGCAAGACGC TGCTCGTGCA CGGCGAACAG
GGGCTCGGCG ACGAGATCAT GTTCGCGTCG ATCGTGCCGG ACATTGTCCG GCAAGCGGCG
CGCGTCGTGC TCGCCTGCGC GCCGTCGCTC GTCTCGCTGT TCCAGCGCGC GTTTCCGTCC
GCGATCGTGC GCGCGCACCG CGCGGGCGTC GCGCCCGCGC GCGTGGACGA TCTCGGGGCG
ATCGACTATC AGTCGCCGAT CGGCAGCCTG CCGCGCTGGC TGCGCGCGAG CGAGGCATCG
TTCGGCACGG GCGCGCCGTA TCTGGCGGCG GACCCGGCGC GCGTCGCATG GTTCGGCGCG
CGGCTGCGCG CGTTGGCGCC GCGCGCCGAT CGCGCGCTGA AAGTCGGCTT GACATGGGGA
TCGAATCCCG CGGCGGCGGT GCCGTCCGCC GCGCGCCGCG CCACGCGCAA GAGCATGCCG
CTGCGGTTGC TCGCGCCGCT CGCGCGGGTG CCGGACGTGC AGTACGTGAG CGTTCAGAAC
GCCGAGCTGG GCGAGCAGGC CGCGACCGTG CCCGAGCTCG ATCTGATCGA TTTCAGCAGC
GCGCTTCGGG ATTTCGCCGA CACCGCGGCG CTCGTCGCGA ATCTTGACGT CGTCGTGAGT
GTCGATACGT CGGTCGCGCA TCTGGCGGGC GCGCTCGGCA AGACGGCCTA TACGCTGCTG
ATGCGCAATT GCGACTGGCG ATACGGATTC GAGGGCGAGC GCTGCGTCTG GTACGAATCG
ATGACGCTGC TGCGCCAGAC GACGCAGGAC GATTGGCTGC CGGTCGTCGA TCGGGTGATC
GACGCGCTGG CGCGGTATCG CAAGCAATAA
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| Protein sequence | MTAELDARVR ALTLRAQQLF DDSRPEQGAL LAAQALALAP DDALALKLVG VAECMRGDHA
AGLVYLERAC LSAPGDANLH YNVAVAHECT GSHERAALSY RHCLRLQPDH ADALWNYGEY
LRLNGHFEAA ARCFEALQAQ ACRYPSMHHR MAVVYTHLHR FDDARRHFAL AMDENIDTRV
TRWERAHLRL GTRDFARGWP DYDTRFDIGH LINVHCHPFP IRLWQGEPLA GKTLLVHGEQ
GLGDEIMFAS IVPDIVRQAA RVVLACAPSL VSLFQRAFPS AIVRAHRAGV APARVDDLGA
IDYQSPIGSL PRWLRASEAS FGTGAPYLAA DPARVAWFGA RLRALAPRAD RALKVGLTWG
SNPAAAVPSA ARRATRKSMP LRLLAPLARV PDVQYVSVQN AELGEQAATV PELDLIDFSS
ALRDFADTAA LVANLDVVVS VDTSVAHLAG ALGKTAYTLL MRNCDWRYGF EGERCVWYES
MTLLRQTTQD DWLPVVDRVI DALARYRKQ
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