Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BURPS668_1543 |
Symbol | glgB |
ID | 4883906 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia pseudomallei 668 |
Kingdom | Bacteria |
Replicon accession | NC_009074 |
Strand | - |
Start bp | 1508052 |
End bp | 1510268 |
Gene Length | 2217 bp |
Protein Length | 738 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 640127471 |
Product | glycogen branching enzyme |
Protein accession | YP_001058584 |
Protein GI | 126440142 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0296] 1,4-alpha-glucan branching enzyme |
TIGRFAM ID | [TIGR01515] alpha-1,4-glucan:alpha-1,4-glucan 6-glycosyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.408672 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACGGATG CGCCCTTCGA TCGCGCCGAC ATCGACGCGC TCCTCGGCGC GCGCCATCCG GACCCGTTCG CGTGCCTCGG CCCGCACCGC GTCGGCGACG CGACGGTCGT GCGCACGCTG CTGCCCGGCG CGCTGCGGGT TCGCGCGATC GCGGCGGGCG GCGGCGTGCT CGGCGAGCTG CGGCAGGTCG ATCCGGCCGG CTGCTTCGCC GGCGCGCTGC CCGATGGGCG GGAACGCGGC GAGCGGCCGC GCTATCGGCT GTCGATCGAC TGGCCCGACG CGCGACAGGA CGTGGAGGAC GCGTATGCGT TCGGCACGCT GCTCGACGAG GATGCGCTCG CGCGCTTCGC GGCGGGCGAT CCGCGCGCGG CGCTCGCGTG CCTCGGCGCG CGCGCGCTCG ACATGGATGG CGTGCCCGGC GTGCGGTTCG CCGTCTGGGC GCCGGGCGCG TCGCGCGTGT CGGTGGTCGG CGATTTCAAC GGCTGGGATG CGCGCCGCCA CCCGATGCGG CTGCGCCGCC CGTGGGGCGT GTGGGAGCTG TTCGTGCCGC GCATCGGCGC GGGCGAGCGC TACAAGTTCG CGCTGCGCGC GCGCGACGGC GCCGCGCTGC CGCTGAAGGC CGACCCGTGC GCGTGCCGCA CCGAGGCGCC GCCGCGCACC GCGTCGATCG TCGCCGATCT CGACGCGCTC GAGCGCTTCG GCTGGCACGA CGACGCGTGG CTGCGCGCGC GCGCGTCGCT CGATCTCGCG CACGCGCCGG TGTCGATCTA CGAAGTCCAT CCGGAATCGT GGCTGCGCGT CGCGGCCGAG GGCAATCGCA GCGCGACGTG GGACGAGCTC GCGCAGCGGC TGATTCCGTA TGCGGCCGGC ATGGGCTTCT CGCACGTCGA GCTCACGCCG ATCGCCGAGT ATCCGTTCGG CGGCTCGTGG GGCTACCAGT CGCTATCGCC GTTCGCGCCG TCCGCGCGGT TCGGGCCGCC GGAAGGCTTC GCGCGCTTCG TCGAGCACGC GCACGCGGCC GGCCTCGGCG TGATCGTCGA CTGGGTGCCC GCGCACTTTC CCGACGATCC GCACGGGCTC GGCAAATTCG ACGGCACCGC GCTGTTCGAG CATGCGGACC CGCGCGAGGG ATGGCATCCG GACTGGCACA CGCACGTGTT CAACGTCGGG CGGCGCGAAG TCGGCGCGTT CCTGATCGCG TCGGCGCTCG CGTGGGCGCA CCGCTATCAC GTCGACGGCA TTCGCGTCGA CGCCGTCGCG TCGATGCTCT ACCGCGACTA CTCGCGCGCG GCGGGCGAAT GGGTGCCGAA CGTGTACGGC GGGCGCGAGA ACCTCGAATC GATCGCGTTC CTGAAGCACT TCAACGACAC GCTGCACGGG CCCGCCGCGC CGCCCGGCGT CGCGACGTTC GCGGAGGAAT CGACCGCATG GCCCGGCGTC ACCGCGCCGA CCGCCGAGCA CGGCCTCGGC TTCGATTTCA AGTGGAACAT GGGCTGGATG CACGACACGC TCGCCTATCT GCGCGAGGAT CCGATCCATC GCCGCCATCA CCACGACCGG CTCACGTTCG GGCTCGTCTA TGCGTTCTCC GAGCGCTTCG TGCTGCCGCT GTCGCACGAC GAAGTCGTGC ACGGCAAGGG CTCGCTCGCG GCCAAGATGC CGGGCGACGC CTGGCAGCGC CTCGCGAACC TGCGCGCGTA CTTCGGCTTC ATGTGGGCGC ATCCGGGCAA GAAGCTGCTG TTCATGGGCG GCGAGTTCGC GCAGTGGGAG GAGTTCGCGC ACGACGCGAC GCCGCAGTGG GATCTGCTCG ACGCGCCCGC GCACCGGGGC GTGCAGCGCC TCGTGCGCGA CCTGAACCGG CTGCATGCGG CCGAGCCGGC GCTGCACGCG CTCGACGACC GGCCCGCCGG GTTCGCGTGG CTCGTCGGCG ACGATCGCAA CAACAGCGTG TTCGCGTTCG TCCGTCGCGA CGATGCGGGC CGCATGCTCG TCGCGGTGTG CAACTTCACG CCGGTGCCGC GCACCGACTA TCGGCTCGGC CTGCCCGCGC CGGGCCGCTG GGCCGAGGTG CTGAACACCG ACGGCGCCGC ATACGGCGGC ACCGACGCGG GCAACGGCGG CGCGGTCCAG GCCGACGAGA TTCCCGCGCA CGGCGAGCGA TGGTCGGCCG CGCTGCGTCT GCCGCCGCTC GCGACGCTAT GGCTGCGCCC CGCCTGA
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Protein sequence | MTDAPFDRAD IDALLGARHP DPFACLGPHR VGDATVVRTL LPGALRVRAI AAGGGVLGEL RQVDPAGCFA GALPDGRERG ERPRYRLSID WPDARQDVED AYAFGTLLDE DALARFAAGD PRAALACLGA RALDMDGVPG VRFAVWAPGA SRVSVVGDFN GWDARRHPMR LRRPWGVWEL FVPRIGAGER YKFALRARDG AALPLKADPC ACRTEAPPRT ASIVADLDAL ERFGWHDDAW LRARASLDLA HAPVSIYEVH PESWLRVAAE GNRSATWDEL AQRLIPYAAG MGFSHVELTP IAEYPFGGSW GYQSLSPFAP SARFGPPEGF ARFVEHAHAA GLGVIVDWVP AHFPDDPHGL GKFDGTALFE HADPREGWHP DWHTHVFNVG RREVGAFLIA SALAWAHRYH VDGIRVDAVA SMLYRDYSRA AGEWVPNVYG GRENLESIAF LKHFNDTLHG PAAPPGVATF AEESTAWPGV TAPTAEHGLG FDFKWNMGWM HDTLAYLRED PIHRRHHHDR LTFGLVYAFS ERFVLPLSHD EVVHGKGSLA AKMPGDAWQR LANLRAYFGF MWAHPGKKLL FMGGEFAQWE EFAHDATPQW DLLDAPAHRG VQRLVRDLNR LHAAEPALHA LDDRPAGFAW LVGDDRNNSV FAFVRRDDAG RMLVAVCNFT PVPRTDYRLG LPAPGRWAEV LNTDGAAYGG TDAGNGGAVQ ADEIPAHGER WSAALRLPPL ATLWLRPA
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