| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS668_1457 |
|---|
| Symbol | mdcB |
|---|
| ID | 4885582 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia pseudomallei 668 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009074 |
|---|
| Strand | + |
|---|
| Start bp | 1420535 |
|---|
| End bp | 1421893 |
|---|
| Gene Length | 1359 bp |
|---|
| Protein Length | 452 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | 640127385 |
|---|
| Product | triphosphoribosyl-dephospho-CoA synthase MdcB |
|---|
| Protein accession | YP_001058500 |
|---|
| Protein GI | 126439789 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG1767] Triphosphoribosyl-dephospho-CoA synthetase |
|---|
| TIGRFAM ID | [TIGR03132] triphosphoribosyl-dephospho-CoA synthase MdcB |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.0818949 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAGCGAA ACGCATGCGC GGTGGCGAAG CCGGCCCGGC GCGGCGCGAT GTGCCGGGAT
AGGGCGCGGG CGCTTGACGA CGGAGGCGGG GCGGATACGC TGTTGGATGC GTTGGATGCG
TTGGATGCGT TGGATGCGTT GGATGCGTTG GATGCGTTGG ATGCGTTGGA TGCGTTGGAT
GCATCAGGTG TATCGAATGC GTCGAATTCG GTGGGAGCGG GGGACGCATC GAACCGGCCG
AACATCGCAG CGGTGTCGAG CATATGGGCT TCCCAGTATT TCCCCCCGGC CACGCGGAAC
GCCTCCGACG GGGCTGACGC GCGAGATAGC CGGGGGCGCC GTCGACATCC GACGTTCGCC
GCGCATCGGC TAGCCTCGCT GACCGCGACC GCGACCGCGA CCGCGACCGC GACCGCGACC
GCGACCGCGA CCGCGACCGC GACCGCAGCC GCAACGCCGG CATCCATCCC CACGCCGACG
CCAAGGCCAA CATCAACATC AACGCCCACG CCAACAGCAA CGGCGATCGC GGCCAACGCG
GTACGCTGCC TGCGCGTCGA GATCGACACG TGGCCGAAGC CCGGACTCGT GAGCCACGTC
GACGCGGGCA GCCACGACGA CATGACGGCC GACACCTTCT ATCGCAGCGC GGCGGCGCTT
GCGCCGTTCT TCGCCGAGCT CGCCGATGCC GGCGCGCGCG ACGCCGGCAT GCCGGCGCTG
CGCAAGATCG GCCTGCGCGC GGAACGCGCG ATGCTGGCCG CGACGGGCGG CGTGAACACG
CATCGCGGCG CGATTTTCGG GCTCGGGCTG CTGTGCGCGG CGGCGGGCCT GCGCGGATCG
CACGAACGGC GCGCGCAACG GGGGCAAGCC GTGGGCGTGA CGCTCGGCGA TCTCGTCGCC
GCGCGCTGGG GCGACGAGAT CGCCGGCGGT CCGCGCGCGG CCGACAGTCA TGGCGCGCGC
GCCGCGCGCC GCTACGGCGC GGGCGGCGCG CGCGCGGAGG CGGCGGGCGG TTTCGCGCGC
GTCTACGCGA TCGGCGTGCC GGCGCTGCGC GACGGCGCGC GGCGCGCGCG GGGCGACGCC
GAGGCCGCGC GCGTGCACGC GTGTTTCGCG CTGATCGCCG CGCTCGACGA CGACACGAAT
CTGCTGTATC GCGGCGGCCG CGACGGCCTC GACTTCGCGC AACGAACCGC GCGCGAATTT
CTCGCGGCGG GCGGCGTGGG CGCGTGCGAC TGGCGCGCGC GCGCGTCCGC CGCGCATCGC
GCGTTCGTCG CCCGCCGGCT GAGCCCGGGC GGCGCGGCGG ACCTGCTCGC GATGAGCCTC
TTCGTCGCCG CGCTCGACGA CGCGCGGGCA TTGCCGTGA
|
|---|
| Protein sequence | MKRNACAVAK PARRGAMCRD RARALDDGGG ADTLLDALDA LDALDALDAL DALDALDALD
ASGVSNASNS VGAGDASNRP NIAAVSSIWA SQYFPPATRN ASDGADARDS RGRRRHPTFA
AHRLASLTAT ATATATATAT ATATATATAA ATPASIPTPT PRPTSTSTPT PTATAIAANA
VRCLRVEIDT WPKPGLVSHV DAGSHDDMTA DTFYRSAAAL APFFAELADA GARDAGMPAL
RKIGLRAERA MLAATGGVNT HRGAIFGLGL LCAAAGLRGS HERRAQRGQA VGVTLGDLVA
ARWGDEIAGG PRAADSHGAR AARRYGAGGA RAEAAGGFAR VYAIGVPALR DGARRARGDA
EAARVHACFA LIAALDDDTN LLYRGGRDGL DFAQRTAREF LAAGGVGACD WRARASAAHR
AFVARRLSPG GAADLLAMSL FVAALDDARA LP
|
|---|
| |