Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BURPS668_1452 |
Symbol | mdcA |
ID | 4883232 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia pseudomallei 668 |
Kingdom | Bacteria |
Replicon accession | NC_009074 |
Strand | + |
Start bp | 1416004 |
End bp | 1417650 |
Gene Length | 1647 bp |
Protein Length | 548 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 640127380 |
Product | malonate decarboxylase, alpha subunit |
Protein accession | YP_001058495 |
Protein GI | 126439758 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG4670] Acyl CoA:acetate/3-ketoacid CoA transferase |
TIGRFAM ID | [TIGR01110] malonate decarboxylase, alpha subunit |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.104759 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGACGGGAT GGAACGAGGC CCGCGCCGCG CGAGCGGCGC GCCTCGCCGC CGCCGCGCCG CTCGCGCGGG GCAAGCGGGT GGCCGCGCGC GATGCGACCG CGCTGCTCGA AGCGGTGCTG CGGCCGGGCG AGCGCGTCTG CATCGAAGGC GACAACCAGA AGCAGGCGGA CCTGCTCGCC GCGGCGCTCG CCGCCGTCGA CAGCGCGAAG GTGCACGGCC TGCACATGGT GCAATCGGGC GTCGTGCTGC CCGAGCATCT CGACGTGTTC GAGCGCGGCA TCGCGAAGCG GCTCGACTAC GCATACTCGG GCCCGCAATC GCAGCGGATC GCGAAGCTGC TGTTCGGCGG CGGCATCGAG CTCGGCGCGG TGCACACGTA TCTCGAGCTC TTCGCGCGCT ACTTCATCGA TCTGACGCCG CACGTCGCGC TCATCGCCGC GGTGAGCGCC GACGCCGACG GCAACCTGTA CACCGGCCCG AACACCGAGG ACACGCCGAC CGTCGTCGAG GCGACCGCGT TCAAGGACGG CATCGTGATC GCGCAGGTCG AGAAGATCGT CGAGCGCGTG CCGCGCGTCG ACATCCCGGG CGATCGCGTG CACTTCGTCG TCGAGGCGGG GCGGCCGTTC TACGTCGAGC CGCTGTTCAC GCGCGACCCG GCGGGCATCA CCGAGACGCA GATCCTCACC GCGATGCTCG CGATCAAGGG CATCTACGCG CGCTACGGCG TGAAGCGGCT CAATCACGGG ATCGGCTTCA ACACGGCGGC GATCGAGCTG CTGCTGCCGA CCTACGGCGA GCGGCTCGGC CTGAAAGGGC AGGTCTGCAC GCACTGGGCG CTGAACCCGC ATCCGACGCT CATCCCCGCG ATCGAATCCG GCTGGGTCGA GCAGATCCAT TGCTTCGGCT CCGAAGTGGG GATGGACGAC TACATCCGCG CGCGCTCGGA CATCTTCTTC ACGGGCGCCG ACGGCTCGCT GCGCTCGAAC CGCGCGTTCT GCCAGACGGC GGGCCTCTAT GCATGCGACC TGTTCATCGG CTCGACGCTG CAGATCGATC TCGCCGGCCA CTCGTCGACG GTGACGGCCG AGCGGATCGC GGGCTTCGGC GGCGCGCCGA ACATGGGCAG CGACGCGCGC GGCCGGCGCC ACCCGAGCGA GCCGTGGCTC AAGGCGGGCG AGGAGGCCGA TGCGCGAACG CCCGCGGCGC TGCGGCGCGG GCGCAAGCTC GTCGTGCAGA TCGGCGAGAC GTTCGGCGAG AAGAACGCGC CGATGTTCGT CGAGCAGCTC GACGCGCTGC GCCTCGCCGA TAAACTCGCG CTCGATCTCG CGCCCGTGAT GGTGTACGGC GACGACGTCA CGCACGTCGT CACCGAGGAA GGGATCGCGA ACCTGCTGAT GTGCCGCGAC GCCGACGAGC GCGAGCACGC GATTCGCGGC GTGGCCGGCT ACACGGAGAT CGGCCGCGGC CGCGATCGCC GGCTCGTCGA GCGGCTGCGC GAGCGCGGCG TGATCCGGCG CCCCGAGGAT CTCGGCATCG ATGCGCTCGA CGCCGACCGG CGGCTGCTCG CCGCGCGCTC GATCAAGGAT CTCGTGCATT GGTCGGAGGG CCTCTACGCG CCGCCCGCCC GATTCCGCAA TTGGTGA
|
Protein sequence | MTGWNEARAA RAARLAAAAP LARGKRVAAR DATALLEAVL RPGERVCIEG DNQKQADLLA AALAAVDSAK VHGLHMVQSG VVLPEHLDVF ERGIAKRLDY AYSGPQSQRI AKLLFGGGIE LGAVHTYLEL FARYFIDLTP HVALIAAVSA DADGNLYTGP NTEDTPTVVE ATAFKDGIVI AQVEKIVERV PRVDIPGDRV HFVVEAGRPF YVEPLFTRDP AGITETQILT AMLAIKGIYA RYGVKRLNHG IGFNTAAIEL LLPTYGERLG LKGQVCTHWA LNPHPTLIPA IESGWVEQIH CFGSEVGMDD YIRARSDIFF TGADGSLRSN RAFCQTAGLY ACDLFIGSTL QIDLAGHSST VTAERIAGFG GAPNMGSDAR GRRHPSEPWL KAGEEADART PAALRRGRKL VVQIGETFGE KNAPMFVEQL DALRLADKLA LDLAPVMVYG DDVTHVVTEE GIANLLMCRD ADEREHAIRG VAGYTEIGRG RDRRLVERLR ERGVIRRPED LGIDALDADR RLLAARSIKD LVHWSEGLYA PPARFRNW
|
| |