Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BURPS668_1212 |
Symbol | |
ID | 4885563 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia pseudomallei 668 |
Kingdom | Bacteria |
Replicon accession | NC_009074 |
Strand | - |
Start bp | 1193369 |
End bp | 1194301 |
Gene Length | 933 bp |
Protein Length | 310 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 640127140 |
Product | RNA polymerase sigma-70 factor |
Protein accession | YP_001058261 |
Protein GI | 126441164 |
COG category | [K] Transcription |
COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family [TIGR02957] RNA polymerase sigma-70 factor, TIGR02957 family |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.413891 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGGTTTTTC AAGCCACCTT TCAGGCCCAT CCCAAGAACA TGACCGAAAC CTCCCGTCCG GCGCCGTCCG ACGAACCGTT CGCCGCGCTG CGCCCGCGCC TTTTCTCGAT CGCATACCGG ATGCTCGGCA CGCGCGCCGA TGCCGAAGAC GTGCTGCAGG ACGCCTGGCT GCGCTGGCAC CAGGCCGAAC GCGACACGCT CGATTCGCCC GAGGCATGGC TCGTCACGGT CGTCACCCGG CTGTCGATCG ATCGGCTGCG CGCCGCGAAG GCGCAGCGCG ACGCCTATGT CGGATGGTGG CTCCCCGAGC CGCTCGTCGA CATCGACGAG CGCACGCCCG AGGCCGCGGC CGAGTTCGCC GACGACCTGT CGGTGGCGCT ACTGTGGGTG CTCGAACGGC TCTCGCCCGA GGAACGCGCG GCATTCCTGC TGCGCCAGGC GTTCGAGCGC GACTACGCGG AAATCGCGCA ACTGCTCGAC AAGAGCGAAG CGGCCTGCCG CCAGCTCGTC CACCGCGCGT CGACGCGCGT GCAGCAGGAA CACCGGCGCT TCGACGTATC GCGCGAGCGC CACCGGCAAC TCGTCGAGCG CTTCGCGCGC GCCGCGGCAA GCGGCGAGCG CAACGCGATC CGGGCGCTGC TCGCCGACGA CGTCGAACTG GTCGGCGACG GCGGCGGCAA GATGCCGTCG TTCTTCAAGG TGCTGCGCGG CGCGCTCCGG ATCGCGAATC TGTATTGGGC CGTCGGCCGA CGCCATGCCG GGCAGATCGA ATACCGGCTC GCGCAAATCA ACGGCGAACC GGGCCTGCTG CGCTTCATCG ACGGGCGGAT CGAATCGGCA CAGGCGTTCG CCACCGACGG CGCGCGAATC GTCGCGATCT ACGCGGTGCG CAATCCGGAC AAGCTCGCGC ATATTCCGAG CTGCCCGGCG TGA
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Protein sequence | MVFQATFQAH PKNMTETSRP APSDEPFAAL RPRLFSIAYR MLGTRADAED VLQDAWLRWH QAERDTLDSP EAWLVTVVTR LSIDRLRAAK AQRDAYVGWW LPEPLVDIDE RTPEAAAEFA DDLSVALLWV LERLSPEERA AFLLRQAFER DYAEIAQLLD KSEAACRQLV HRASTRVQQE HRRFDVSRER HRQLVERFAR AAASGERNAI RALLADDVEL VGDGGGKMPS FFKVLRGALR IANLYWAVGR RHAGQIEYRL AQINGEPGLL RFIDGRIESA QAFATDGARI VAIYAVRNPD KLAHIPSCPA
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