Gene BURPS668_1212 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBURPS668_1212 
Symbol 
ID4885563 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia pseudomallei 668 
KingdomBacteria 
Replicon accessionNC_009074 
Strand
Start bp1193369 
End bp1194301 
Gene Length933 bp 
Protein Length310 aa 
Translation table11 
GC content69% 
IMG OID640127140 
ProductRNA polymerase sigma-70 factor 
Protein accessionYP_001058261 
Protein GI126441164 
COG category[K] Transcription 
COG ID[COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog 
TIGRFAM ID[TIGR02937] RNA polymerase sigma factor, sigma-70 family
[TIGR02957] RNA polymerase sigma-70 factor, TIGR02957 family 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.413891 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGGTTTTTC AAGCCACCTT TCAGGCCCAT CCCAAGAACA TGACCGAAAC CTCCCGTCCG 
GCGCCGTCCG ACGAACCGTT CGCCGCGCTG CGCCCGCGCC TTTTCTCGAT CGCATACCGG
ATGCTCGGCA CGCGCGCCGA TGCCGAAGAC GTGCTGCAGG ACGCCTGGCT GCGCTGGCAC
CAGGCCGAAC GCGACACGCT CGATTCGCCC GAGGCATGGC TCGTCACGGT CGTCACCCGG
CTGTCGATCG ATCGGCTGCG CGCCGCGAAG GCGCAGCGCG ACGCCTATGT CGGATGGTGG
CTCCCCGAGC CGCTCGTCGA CATCGACGAG CGCACGCCCG AGGCCGCGGC CGAGTTCGCC
GACGACCTGT CGGTGGCGCT ACTGTGGGTG CTCGAACGGC TCTCGCCCGA GGAACGCGCG
GCATTCCTGC TGCGCCAGGC GTTCGAGCGC GACTACGCGG AAATCGCGCA ACTGCTCGAC
AAGAGCGAAG CGGCCTGCCG CCAGCTCGTC CACCGCGCGT CGACGCGCGT GCAGCAGGAA
CACCGGCGCT TCGACGTATC GCGCGAGCGC CACCGGCAAC TCGTCGAGCG CTTCGCGCGC
GCCGCGGCAA GCGGCGAGCG CAACGCGATC CGGGCGCTGC TCGCCGACGA CGTCGAACTG
GTCGGCGACG GCGGCGGCAA GATGCCGTCG TTCTTCAAGG TGCTGCGCGG CGCGCTCCGG
ATCGCGAATC TGTATTGGGC CGTCGGCCGA CGCCATGCCG GGCAGATCGA ATACCGGCTC
GCGCAAATCA ACGGCGAACC GGGCCTGCTG CGCTTCATCG ACGGGCGGAT CGAATCGGCA
CAGGCGTTCG CCACCGACGG CGCGCGAATC GTCGCGATCT ACGCGGTGCG CAATCCGGAC
AAGCTCGCGC ATATTCCGAG CTGCCCGGCG TGA
 
Protein sequence
MVFQATFQAH PKNMTETSRP APSDEPFAAL RPRLFSIAYR MLGTRADAED VLQDAWLRWH 
QAERDTLDSP EAWLVTVVTR LSIDRLRAAK AQRDAYVGWW LPEPLVDIDE RTPEAAAEFA
DDLSVALLWV LERLSPEERA AFLLRQAFER DYAEIAQLLD KSEAACRQLV HRASTRVQQE
HRRFDVSRER HRQLVERFAR AAASGERNAI RALLADDVEL VGDGGGKMPS FFKVLRGALR
IANLYWAVGR RHAGQIEYRL AQINGEPGLL RFIDGRIESA QAFATDGARI VAIYAVRNPD
KLAHIPSCPA